Ottowia testudinis: J1M35_07950
Help
Entry
J1M35_07950 CDS
T08188
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
otd
Ottowia testudinis
Pathway
otd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J1M35_07950 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otd03019
]
J1M35_07950 (pnp)
03016 Transfer RNA biogenesis [BR:
otd03016
]
J1M35_07950 (pnp)
Enzymes [BR:
otd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J1M35_07950 (pnp)
Messenger RNA biogenesis [BR:
otd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J1M35_07950 (pnp)
Transfer RNA biogenesis [BR:
otd03016
]
Prokaryotic type
tRNA degradation factors
J1M35_07950 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
S1_RRP5
KH_2
KH_SLS1_2
DNA_pol3_a_NI
OB_RRP5_4th
DUF5813
Par3_HAL_N_term
Collagen
Motif
Other DBs
NCBI-ProteinID:
QTD46792
UniProt:
A0A975CKQ5
LinkDB
All DBs
Position
1696870..1699185
Genome browser
AA seq
771 aa
AA seq
DB search
MSLFNKVTKSFQWGDKTVVMETGEIARQANGAVLVDIDGTVVLATVAASKTAKPGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSELETLTSRLIDRPIRPLFPDGFFNEVHVVIHTL
SLNPEVDADIAAMIGVSAALSISGIPFNGPIGAARVGYVGGEYVLNPGPTARKSSALDLV
VAGTESAVLMVESEANQLTEDVMLGAVVFGHDQGRIAINAIHELVREAGKPLWADNGTWA
PEVKDETFIGKVGALAEPKLREAYQIRSKQARTQALREATVAVKQALTDEAVAFDPVKLD
NLLFEIEARIVRGQILAGEPRIDGRDTRTVRPIEIRNSVLPRTHGSALFTRGETQALVVT
TLGTERDAQRIDALAGEFEDRFLFHYNMPPFATGEVGRMGSTKRREVGHGRLAKRALIPL
LPAKDEFPYTIRVVSEITESNGSSSMASVCGGCLSMMDAGVPMKAHVAGIAMGLIKDGNR
FAVLTDILGDEDHLGDMDFKVAGTTTGITALQMDIKIQGITKEIMQVALAQAKEARMHIL
GKMQEAMGEAKAEISSYAPKLYTMKINPEKIRDVIGKGGATIRMLTEETGTTIDIGEDGT
ITIASTDAAKADDAKRRIEAITAEAEIGKVYEGPITKVLEFGALVNILPGKDGLLHISQI
AHERVERVSDYLQEGQVVKVKVLETDDKGRIKLSMKALLDRPEGMEDRPPREYREPRGDR
GDRGDRGDRPPRGDRGDRGPREDRGDRPPRAEREERPAPVEGAEGADQQQQ
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagcctattcaacaaagtcaccaagtccttccagtggggcgacaagaccgtcgtcatg
gaaacgggcgaaatcgcccgccaggccaatggcgccgtgctggtcgacatcgacggcacc
gtggtgctggccaccgtggcggccagcaagacggccaagccggggcaggatttcttcccg
ctcaccgtcgactacatcgagaaaacctacgccgccggcaagattcccggcagcttcttc
aagcgcgaagccaagccgagcgagctggaaacgctgaccagccgcctgatcgatcgcccg
atccgcccgctgttccccgatggcttcttcaacgaagtgcacgtggtcatccacacgctg
tcgctgaaccccgaggtggatgccgacatcgccgccatgatcggcgtgagcgcggcgctg
tccatcagcggcattccgttcaacggccccatcggcgcggcgcgcgtgggctacgtgggc
ggcgaatacgtgctgaaccccggccccaccgcgcgcaagagcagcgcgctggacctggtc
gtcgccggtaccgaaagcgccgtgctgatggtcgaatccgaggccaaccagttgaccgaa
gacgtgatgctgggcgccgtggtgttcggccacgaccagggcaggattgccatcaacgcc
atccacgagctggtgcgcgaagccggcaagccgctgtgggccgacaacggcacctgggca
cctgaagtcaaggacgaaaccttcatcggaaaagtcggtgcgctggccgagcccaagctg
cgcgaggcctatcaaatccgcagcaagcaggctcgcacgcaagcgctgcgcgaggccacc
gtggccgtcaagcaggcgctgaccgacgaggccgtggcattcgatccggtcaagctcgac
aacctgctgttcgagatcgaggcgcgcatcgtgcgcggccagatcctggctggcgagccg
cgcatcgacggccgcgacacgcgcaccgtgcgtcccatcgaaatccgcaactctgttctg
ccgcgcacgcacggctcggcgctgttcacgcgcggcgaaacgcaggcgctggtcgtcacc
acgctgggcaccgagcgcgacgcgcagcgcatcgacgcgctggcgggtgagtttgaagac
cgcttcctcttccactacaacatgcctccgttcgccacgggcgaagtgggccgcatgggc
tcgaccaagcgccgcgaagtcggccacgggcgcctggccaagcgcgcgctgattccgctg
ctgccggccaaggacgagtttccgtacaccatccgcgtggtgtcggaaatcaccgagtcc
aacggctcctcgtcgatggcctcggtgtgcggcggctgcctgtcgatgatggacgccggc
gtgccgatgaaggcgcacgtggccggcatcgccatgggcctgatcaaggacggcaaccgc
tttgccgtgctgaccgacatcctgggcgacgaagaccacctgggcgacatggacttcaag
gtggccggcaccaccaccggcatcaccgcgctgcagatggacatcaagatccagggcatt
accaaggaaatcatgcaggtcgccctggcgcaagccaaggaagcgcgcatgcacatcctg
ggcaagatgcaagaggccatgggcgaggccaaggccgagatcagcagctacgcgcccaag
ctctacaccatgaagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgcc
accatccgcatgctgaccgaggaaactggcaccaccatcgacatcggcgaagacggcacc
atcaccatcgccagcaccgacgccgccaaggccgacgacgccaagcgccgcatcgaggcc
atcacggccgaagccgaaatcggcaaggtctacgaaggcccgatcaccaaggtgctggag
ttcggcgcgctggtcaatatcctgcccggcaaggacggcctgctgcacatcagccagatt
gcccacgagcgcgtggagcgcgtgagcgactatttgcaggaagggcaggtggtcaaagtc
aaggtgctggagaccgacgacaagggccgaatcaagctgtcgatgaaggcgctgctagac
cgcccggagggcatggaagaccgcccgccgcgcgagtaccgcgagccgcgcggtgaccgg
ggcgatcgcggtgatcgcggtgatcgtcccccgcgtggtgaccgcggtgaccgcggcccg
cgcgaagaccgtggcgaccgcccgccgcgtgccgagcgcgaggagcgccctgcaccggtg
gaaggcgccgaaggcgctgaccagcaacagcagtga
DBGET
integrated database retrieval system
