Ottowia testudinis: J1M35_09425
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Entry
J1M35_09425 CDS
T08188
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
otd
Ottowia testudinis
Pathway
otd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J1M35_09425 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otd03019
]
J1M35_09425 (pcnB)
Enzymes [BR:
otd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
J1M35_09425 (pcnB)
Messenger RNA biogenesis [BR:
otd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
J1M35_09425 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Slu7
DUF2204
Motif
Other DBs
NCBI-ProteinID:
QTD47056
UniProt:
A0A975H565
LinkDB
All DBs
Position
2001643..2003229
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AA seq
528 aa
AA seq
DB search
MINKFIGRLIDKATAGSKGRKRFGKRAEIGPDGHGINPALVDERAANVVRTLKEAGYEAY
IVGGAVRDLLLGLKPKDFDVATNATPEQVKQLFRRAFIIGRRFRIVHVVYGRGREHEVIE
VSTFRAYMDNAAAEAVSGNERTAKGQLAGMKHAVDASGRVLRDNVWGSQEEDAARRDFTV
NAMYYDPETRVVVDYHSGIQDSRKKLLRMIGDAATRYREDPVRIMRAVRFGAKLSGLGFT
LEPKTAKPLVEARALLAEVPQSRLFDEMIKLLQTGHAVPSVDQLRKLGLGKGIYPLLDVV
VERADQPFVKAALADTDRRVSEGKPVAPSFLLACVLWQDVLAGWKARLARAEHPFPALQD
AIDEVFDARIGDVSGRGKLGADMREIWMMQPRFEKRSGNTPFSLAEQPRFRAGFDFLRLR
ADVGEIDEELADWWQAFSLADDGVRESLVRELRAEQQRVKKQQPPRVHRVPKQPLAPEGQ
AQEAPESVADEAGEDSTATPAKKRRRRRRKPSSGNGGAPAAPAPSGGD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacaagttcatcggccggctgatcgacaaggccacggcaggcagcaagggccgc
aagcgctttggcaaacgtgccgagatcggccccgacggccacggcatcaaccccgcgctg
gtcgatgagcgcgccgccaacgtggtgcgcacgctgaaagaggccggttacgaggcctac
atcgtcggcggcgccgtgcgcgatttgcttctgggcctgaaacccaaggacttcgacgtt
gccaccaacgccacgcccgagcaggtcaagcagctgttccggcgcgctttcatcatcggc
cggcgctttcgcatcgtgcacgtcgtgtacggacgcgggcgcgagcacgaagtgatcgag
gtctccaccttccgcgcctacatggacaacgccgctgccgaagccgtcagcggcaacgaa
cgcaccgccaagggtcaactggccggcatgaagcacgccgtggatgcgtcgggccgcgtg
ctgcgcgacaacgtgtggggctcgcaggaagaagacgccgcgcggcgcgacttcaccgtc
aacgccatgtactacgaccccgaaacgcgcgtggtggtcgactaccacagcggcatccag
gattcgcgcaagaagctgctgcgcatgattggcgacgccgccacgcgctaccgcgaagac
ccggtgcgcatcatgcgcgcggtgcggtttggcgccaagttgagcgggctgggtttcacg
ctcgaacccaagacggccaagccgctggtcgaagcgcgcgcattgctggccgaggtgccg
caaagccgcctgttcgacgagatgatcaaactgctgcaaaccgggcatgccgtgcccagc
gtcgatcaactgcgcaagctgggcctgggcaagggcatctatccgctgttggatgtggtg
gtcgagcgcgccgaccaacctttcgtcaaggctgcgctggccgacaccgaccgccgcgtg
tcggaaggcaagccggtggcgccgtcgttcttgctggcctgcgtgctgtggcaggacgtg
ctggccggctggaaggcgcggctggcgcgcgccgaacacccgttccccgcgctgcaggac
gccatcgacgaggtgttcgacgctcgcatcggcgatgtgtcgggccgcggcaagctgggt
gccgacatgcgcgaaatctggatgatgcagccgcgctttgaaaagcgcagcggcaatacc
ccgttcagcctggccgaacagccgcgctttcgcgccggcttcgacttcctgcgcctgcgc
gccgacgtcggcgagattgacgaagagttggccgattggtggcaagccttcagcctggcc
gacgacggcgtgcgcgaaagcctggtgcgcgagttgcgcgccgagcagcagcgggtcaaa
aagcagcagccgccgcgcgtgcaccgggtgccaaaacagcccttagcgcccgaggggcaa
gcgcaagaagctcctgaatctgtagcggatgaggccggcgaggacagcaccgccacgccc
gccaaaaagcgccgccgccggcgccgcaagccgtcgtccggcaacggcggcgcacctgca
gcgcccgcgccgagcggcggtgattga
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