Ottowia testudinis: J1M35_17860
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Entry
J1M35_17860 CDS
T08188
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
otd
Ottowia testudinis
Pathway
otd00300
Lysine biosynthesis
otd00470
D-Amino acid metabolism
otd01100
Metabolic pathways
otd01110
Biosynthesis of secondary metabolites
otd01120
Microbial metabolism in diverse environments
otd01230
Biosynthesis of amino acids
Module
otd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
otd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J1M35_17860 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J1M35_17860 (dapF)
Enzymes [BR:
otd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
J1M35_17860 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PuhC
Motif
Other DBs
NCBI-ProteinID:
QTD44893
UniProt:
A0A975CK31
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All DBs
Position
complement(3768226..3769170)
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AA seq
314 aa
AA seq
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MRIRFTKMQGAGNDFVVLDETRERLHLTPAQYRFLGDRHFGVGADQILTVRPAPSPDVDF
EYVIHNGADGGEVEHCGNGARCFVRYVREHGLTDKRQVRVKVQRGVIELAEHDDGRVSVD
MGAPVFDLAQIPFNPADLTPVPAGATPDHVWRLWPLSLKPNQPSALDSQAQEAIVNVAVL
SMGNPHAVLLVGDVETAPVATHGPLIERHPAFPNRVNAGFMQIMDRGHARLRVHERGAGE
TLACGTGACAAAVAGIRLGLLDARVDVQTRGGQLTVAWAGGAQDHVVMTGPATTVFEGSI
DLPDDLFDQAASGH
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcgctttaccaagatgcagggcgcgggcaacgatttcgtggtgctcgacgag
acacgcgagcggctgcatttgacgcccgcccagtaccgctttctgggcgaccggcacttc
ggggtgggtgccgaccaaatcctgacagtgcggccagcgccgtcgcccgatgtcgatttc
gagtacgtgatccacaacggcgccgacggcggcgaggtggagcattgcggcaacggcgcg
cgctgcttcgtgcgctatgtgcgcgagcacgggctgaccgacaaacgccaggtgcgcgtc
aaggttcaacgcggcgtgatcgagctggcggaacatgatgacggccgcgtcagcgtcgac
atgggcgcgccggtgttcgacttggcgcagattcccttcaaccccgctgatttgacgccc
gtgccggcgggtgccacgcccgatcacgtgtggcggctctggccgttgagtttgaagcca
aatcagccctcggcgcttgacagtcaagcgcaggaagctattgttaatgtagcggttttg
tccatgggaaacccgcacgcggtgctgctggtgggcgatgtggagactgcgccggtggcc
actcatggccccttgatcgagcgccacccggctttccccaaccgcgtcaacgctggcttc
atgcagatcatggatcgcggccacgcgcggctgcgcgtgcacgagcgcggcgctggcgag
acgctggcctgcggcaccggcgcctgcgcggcggcggtggcgggcattcgcctcgggctg
ctggatgcgcgcgttgatgtgcagacccgcggcgggcagctcaccgtcgcctgggctggc
ggcgcgcaagaccacgttgtcatgactggccccgccaccaccgtgttcgagggcagcatc
gacctgcccgacgacttattcgaccaggccgccagcggccattga
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