Ottowia testudinis: J1M35_18830
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Entry
J1M35_18830 CDS
T08188
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
otd
Ottowia testudinis
Pathway
otd00521
Streptomycin biosynthesis
otd00523
Polyketide sugar unit biosynthesis
otd00525
Acarbose and validamycin biosynthesis
otd00541
Biosynthesis of various nucleotide sugars
otd01100
Metabolic pathways
otd01110
Biosynthesis of secondary metabolites
otd01250
Biosynthesis of nucleotide sugars
Module
otd_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
otd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J1M35_18830 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J1M35_18830 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
J1M35_18830 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J1M35_18830 (rfbB)
00525 Acarbose and validamycin biosynthesis
J1M35_18830 (rfbB)
Enzymes [BR:
otd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
J1M35_18830 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
QTD45056
UniProt:
A0A975CH96
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All DBs
Position
complement(3963609..3964664)
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AA seq
351 aa
AA seq
DB search
MIFVTGGAGFIGSNFVLDWLAQTNEPVFNLDKLTYAGNLANLQALQGDGRHIFVQGDIGD
TALVARLLAEHRPRAIVNFAAESHVDRSIHGAEDFIATNIVGTYRLLESARAYWSALDAD
ARAAFRFLHVSTDEVYGSLAPGAAAFTEEHVYEPNSPYSASKAASDHLVRAWHHTHGLPV
LTTNCSNNYGPFHFPEKLIPLMIVNALAGKALPVYGDGQQVRDWLYVTDHCSAIRRVLDA
GTVGETYNVGGWNEKTNLSIVHTVCDLLDELAPRAGGGSYREQITHVKDRPGHDRRYAID
ARKIERELGWKPAETFETGIRKTIAWYLANAEWTRDVQSGAYRDWVAAQYE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgattttcgttactgggggcgcgggtttcattggcagcaatttcgttttggactggctg
gcccaaaccaacgagcccgtgttcaaccttgacaagctcacctacgctggcaacctggcc
aatctgcaggcgctgcaaggcgatgggcgccatatttttgtgcagggtgacattggtgat
accgctttggtggcgcggttgttggctgagcaccgcccgcgggccatcgtcaacttcgcc
gccgaaagccacgtcgaccgctcgatccacggcgccgaggacttcattgccaccaacatc
gtgggcacttaccgtctgctggaaagcgcgcgggcttactggagtgccctggacgcggac
gcgcgggcggcgttccgctttctgcatgtgtccactgacgaggtctatggctcgctggcg
cccggcgccgcggcgtttaccgaggaacacgtgtacgagcccaacagcccctacagcgcc
agcaaggcggccagcgaccatttggtccgtgcctggcaccacacgcacggactgccggtg
ctgaccaccaactgctccaacaattacgggccgtttcatttccctgaaaagctgatcccg
ctgatgatcgtcaacgcgctggcaggcaaggcgctgccggtgtatggcgacggtcaacag
gtgcgcgactggctgtatgtcaccgatcattgcagcgccattcgccgcgtgctggacgcg
ggcacggtgggggagacctacaacgtcggcggctggaacgaaaagaccaatctgtccatc
gtccataccgtgtgcgatttgctcgacgagctggcgccgcgcgccggtggcggcagttat
cgcgaacagatcacacatgtgaaggatcgccccggccacgaccgccgctatgccatcgat
gcgcgcaagatcgagcgcgaattgggctggaaacccgcggagaccttcgagaccggtatc
cgcaagaccatcgcctggtacctggccaacgcggagtggacgcgcgacgtgcagtcgggc
gcctatcgcgactgggtggcggctcagtacgaatga
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