Opitutus terrae: Oter_0279
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Entry
Oter_0279 CDS
T00689
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ote
Opitutus terrae
Pathway
ote03030
DNA replication
ote03430
Mismatch repair
ote03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Oter_0279
03430 Mismatch repair
Oter_0279
03440 Homologous recombination
Oter_0279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ote03032
]
Oter_0279
03400 DNA repair and recombination proteins [BR:
ote03400
]
Oter_0279
Enzymes [BR:
ote01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Oter_0279
DNA replication proteins [BR:
ote03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Oter_0279
DNA repair and recombination proteins [BR:
ote03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Oter_0279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACB73569
UniProt:
B1ZQ89
LinkDB
All DBs
Position
complement(312434..313120)
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AA seq
228 aa
AA seq
DB search
MPQCVAVIWTEQPIFFIDFEGNQTSGVLELGVVEVHGGAIGATHTRLCRPTGPVRPEDAA
LHGLRTHVLADCAPFADEWETFARWRERGPLAAHYAGVENALLKATWPYPRSSPDFARPG
ESVVDWGPWIDTGRLYAQLYPELGTGQLEALVAACGLKHELDALAAQYCPPERRRYHAAL
YDALAGALLLASLARDPRLATLSIMQLLALSTLDADKRDALQQRELFE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagtgtgtggcggtgatctggaccgagcagccgatcttcttcatcgatttcgag
ggtaaccagacctcgggtgtgctggagctcggggtggtcgaggtgcacggcggtgcgatt
ggggcgacgcacacgcggctgtgccggccaaccgggcctgtgcgccccgaagatgcggcg
ttgcatgggttgcggacgcacgtgctcgcggactgcgcgccgttcgcggacgagtgggaa
acctttgcgcgctggcgcgagcgcgggccgctggccgcccactatgcgggcgtggagaac
gcgctgctcaaggcaacgtggccctatccgcgtagctcgccggatttcgcgcgtccgggt
gagagcgtggtggattggggaccctggatcgacacgggccggttgtatgcgcagctctat
cctgagctcggcacgggccagctcgaagcactggtggcggcgtgcggtttgaagcacgag
ctcgacgcgctcgcggcgcagtattgtccgccggagcgccggcgctatcacgcggcgctc
tacgatgcactggccggagcgttgctcctggcgtcactggcgcgcgatccacggctggcc
acgctttcgatcatgcaattgctcgcgctgagcacgctcgacgccgacaagcgcgacgca
ctgcagcagcgggaattgttcgagtag
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