Opitutus terrae: Oter_0293
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Entry
Oter_0293 CDS
T00689
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ote
Opitutus terrae
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ote03019
]
Oter_0293
03009 Ribosome biogenesis [BR:
ote03009
]
Oter_0293
Messenger RNA biogenesis [BR:
ote03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Oter_0293
Ribosome biogenesis [BR:
ote03009
]
Prokaryotic type
rRNA processing factors
Oter_0293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
ACB73583
UniProt:
B1ZQA3
LinkDB
All DBs
Position
333864..335441
Genome browser
AA seq
525 aa
AA seq
DB search
MSVFQKEKGSYRELIINSEPLEKRVALLVDGRLEKFEIERESDNRMVGGIYKGRIKNLDA
GLKAAFVDIGYTKNAFLHYWDMLPAAADSSVEVVRVNKKKNAPPRPVDPTVKDIPQMYPP
GTDIVIQVTKGPIGTKGPRTTTNLSIPGRYLILTPFSDGCGISRKIEDPAERKRLKQLIN
ELTIPEGMGVIVRTAGEGKKARYFVRDLHILLKTWQDITNKMQNERAPACLYQEPDLVER
TVRDFLTEEVDRVLIDNREDFERTQQLVAMISKRSANKIAFYKDSIPIFERFNIERQIEQ
TGQRKVPLPSGGEIVIDETEALISIDVNTGSHKSRGGDEKNVIYAVNLEAATEIARQIRL
RNLGGLVIIDFIDMKERRHRNAVYEKMVQEMSSDKAKNHILPISTLGILQMTRQRQQESL
SSNLYTDCPYCRGRGIVKSATTMSVELQRKLSSVVRRLQLRNDGREYSLRVLVHPSILER
LRSEDAELLVRMEKLFGVKLAFRADPNYHLENFKIINALTGEEYR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgttttccaaaaggagaagggctcctatcgcgagttgatcatcaactccgagccg
ctggaaaaacgcgtcgcgctgctcgtcgacggccggctggaaaaattcgagatcgagcgc
gagtcggacaaccggatggtcggcggcatctacaagggccgcatcaagaatctcgacgcc
ggcctcaaggcggcattcgtcgacatcggctacaccaagaacgcgtttctgcattactgg
gacatgctccccgccgccgccgactcgtccgtcgaggtcgtccgcgtcaacaagaagaag
aatgccccgccgcggccggttgacccgaccgtgaaggacatcccgcagatgtatccgccg
ggcacggatatcgtgatccaggtcacgaagggcccgatcggcaccaagggcccgcgcacc
acgacgaacctttccatccccggccgctacctgatcctcacgccgttctccgatggctgc
ggcatctcccggaagatcgaggatcccgccgagcgcaagcggctgaagcagctgatcaac
gagctcacgattcccgagggcatgggcgtgatcgtccgcaccgccggcgagggcaagaag
gcccgctatttcgttcgcgatctgcacatcctgctgaagacctggcaggacatcacgaac
aagatgcagaacgagcgcgccccggcctgcctctaccaggagccggatctcgtcgagcgc
accgtgcgtgatttcctgaccgaggaggtcgaccgcgtgctgatcgacaaccgcgaggat
ttcgagcgcacgcagcagctggtggcgatgatctcgaaacgctccgccaacaagatcgcg
ttctacaaggacagcatcccgatcttcgagcggttcaacatcgagcggcagatcgagcag
accggccagcgcaaggttccgctgccgtccggcggcgaaatcgtcatcgacgaaaccgag
gcgctcatctcgatcgacgtgaacaccggttcgcacaagagccgcgggggcgacgagaag
aacgtcatctacgccgtcaacctcgaggccgcgaccgagatcgcgcgccagatccggctg
cgcaacctcggcgggctggtgatcatcgacttcatcgacatgaaggagcggcgccaccgc
aacgccgtctacgagaagatggtccaggagatgtcctcggacaaagcgaagaaccacatc
ctgccgatctcgacgctgggcatcctgcagatgacgcgccagcgccagcaggaatcgctt
tcgagcaatctctacaccgactgcccgtattgccgtggccgcggcatcgtgaagtcggcg
acgacgatgtcggtcgagctccagcgcaagctgagttcggtggtgcggcggctgcaattg
cgcaacgacggccgggagtattcgctccgcgtcttggtgcacccgagcatccttgagcgc
ctgcgcagcgaggacgccgagctgctggtgcggatggagaaactcttcggcgtgaagttg
gccttccgcgccgacccgaactatcatctcgagaatttcaagatcatcaacgccctcacc
ggcgaagagtatcggtag
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