Opitutus terrae: Oter_0402
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Entry
Oter_0402 CDS
T00689
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
ote
Opitutus terrae
Pathway
ote02020
Two-component system
ote02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Oter_0402
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Oter_0402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ote03021
]
Oter_0402
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ote02035
]
Oter_0402
Transcription machinery [BR:
ote03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Oter_0402
Bacterial motility proteins [BR:
ote02035
]
Flagellar system
Flagellar assembly proteins
Stator
Oter_0402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
ACB73692
UniProt:
B1ZR25
LinkDB
All DBs
Position
complement(480805..481593)
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AA seq
262 aa
AA seq
DB search
MNSTVASGKDAAPKTVWRAYQGVSPSNVDEKDLIERHLYLVRNVVDRIKLNLPTHIDADD
LYSVGVTGLIAAVRKFDPEQGCTFASYAAMRIRGAVLDELRRMDWCPRRARARSRKLKET
IIEVEQKLGRAASDEEICSALGLTQKDYAKWVEDARPVTFLAIDHRNENEDGEGASLHEL
LKDETDVTGRENLEKRELLELLTQRISELPDIPKKILAMYYFENMRLAEIAAVFNLTESR
ICQIHAQTILGLRGYLGRARNR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaccgtcgcttcaggcaaggatgccgctcccaagacagtctggcgcgcctat
caaggcgtttcgcccagcaacgtcgatgagaaggatctgatcgagcgccacctctacctc
gtccgcaacgtagtcgaccggatcaaactgaatctgccgacgcatatcgatgctgacgac
ctctacagcgtgggcgtcaccggcctgatcgcggcggtccgcaagttcgacccggagcag
gggtgcaccttcgccagctacgccgccatgcgtatccgcggcgccgtgttggacgagctg
cggcggatggactggtgtccgcgccgcgcccgcgcccgctcgcgcaagctcaaggagacc
atcattgaggtggagcagaagctcggtcgcgcggcgagcgacgaggaaatctgttccgcc
ctcgggctgacgcagaaggattatgcgaagtgggtcgaggatgcccggccggtgaccttc
ctcgcgatcgatcaccgcaacgagaacgaggatggcgaaggcgcttccctgcacgagttg
ctcaaggacgagaccgacgtcaccggtcgcgaaaacctcgagaagcgcgagctgctggag
cttctgactcaacgaatctccgaattgcccgatataccgaagaagatcctcgccatgtat
tacttcgagaacatgcgcctggcggaaatcgcggccgttttcaacctcacggagtcgcgc
atctgccagattcacgctcagaccatcctcggtctgcgcggctacctcggccgcgcgcgc
aatcgctaa
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