Opitutus terrae: Oter_1049
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Entry
Oter_1049 CDS
T00689
Name
(GenBank) putative RNA polymerase, sigma 28 subunit, FliA/WhiG family
KO
K02405
RNA polymerase sigma factor FliA
Organism
ote
Opitutus terrae
Pathway
ote02020
Two-component system
ote02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Oter_1049
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Oter_1049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ote03021
]
Oter_1049
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ote02035
]
Oter_1049
Transcription machinery [BR:
ote03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Oter_1049
Bacterial motility proteins [BR:
ote02035
]
Flagellar system
Flagellar assembly proteins
Stator
Oter_1049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_10
HTH_23
Imm3
HTH_28
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ACB74337
UniProt:
B1ZMJ2
LinkDB
All DBs
Position
1309463..1310185
Genome browser
AA seq
240 aa
AA seq
DB search
MLLSVSSSPASLADTLTIVDVAVAAVARRLPAHVSREDLASAGKLALVEAMLRFDGPAEQ
LRGYCFARVRGALLDELRRLDPLSRHTRSQVTFVRRATAALEKELHRAPTRDEIVTATGY
SHETLTQLERLAEAAQACSIDETDAYGDDLHVIEDEAACPARTAESLDAHSSVHVALARL
PANHAHVLRRYYLDDATLDVIAGELGVSKERVRQLREAAEKKLREDFIVLAVWQSLLANR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgctcctctcggtatccagttcaccggcttcgcttgccgacacgctcacgattgtggac
gtggcggtggcggccgtcgcacgccggttgccggcccacgtgtcgcgcgaagacctcgct
agcgcgggcaagctcgccctcgtcgaggcgatgctgcgtttcgacggtccggccgaacag
ctccgcggttactgcttcgcccgggttcgcggcgctctcctggatgagctccgccgcctt
gacccgctgtctcgccacacgcgcagtcaggtgaccttcgttcggcgtgcaacggcagcg
ctggagaaagagctccaccgtgcgcccacgcgggacgagatcgtcacggccaccggctac
tcgcacgagacgctcactcaactagagcgtctcgccgaggccgctcaagcgtgctcgatc
gatgagaccgacgcctacggtgacgacctgcacgtcatcgaagacgaagccgcgtgccct
gcacgcacggctgagtcgctcgacgcacacagctccgtgcatgtggcgctggcgcgcctg
cctgcgaatcatgctcatgtgctccgccgctactatctcgacgatgccacgctcgacgtg
atcgccggtgaactcggcgtctccaaagagcgcgtgcgccaactacgcgaagccgccgag
aaaaagctccgcgaggacttcatcgttctcgcggtgtggcagtcgctcctggccaaccga
taa
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integrated database retrieval system
