Opitutus terrae: Oter_1140
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Entry
Oter_1140 CDS
T00689
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ote
Opitutus terrae
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ote03032
]
Oter_1140
03400 DNA repair and recombination proteins [BR:
ote03400
]
Oter_1140
Enzymes [BR:
ote01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Oter_1140
DNA replication proteins [BR:
ote03032
]
Prokaryotic type
DNA Topoisomerases
Oter_1140
DNA repair and recombination proteins [BR:
ote03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Oter_1140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ACB74428
UniProt:
B1ZNJ4
LinkDB
All DBs
Position
1425502..1426650
Genome browser
AA seq
382 aa
AA seq
DB search
MENRSSPAPAPDAIASAREAGLRYVSDESPGITRKLAGKRARYLDPQGRAIKDPATLARI
KRLAIPPAWSEVWICPLANGHIQATGRDARRRKQYRYHPDWSSVRDGAKFERTIAFGRAL
PKIRQHVARDLARRRLDRRKVLAAMVRLLESTLVRIGNEEYAKQNRSFGLSTMRDRHVRI
GRGTLHFEFRGKSGKNHQIDLHDPRLAEIVRRTQELPGQDLFQYVDDDGEPQKIGSADVN
EYLREIAGEEFSAKDFRTWAGTVLAALALRELGPFATKAEAKRNLVQAIERVSGRLGNTP
AVCKKCYVHPVVLQSYLDGVTLEQVKAKAGAVLASAGRNGNAGLSAEEKAVLAFLQRKLP
TTAERLAKSIRQEARKRGRGSR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaatcgttcttcgccggctcccgctccggacgccatcgcctccgcgcgcgaggcg
gggttgcgttacgtcagcgacgagtcgccgggcatcacgcgcaaactggccggcaaacgc
gcgcggtacctcgatccgcagggacgcgccatcaaggatcccgccacgctcgcgcggatc
aagcggctggcgattccgccggcatggagcgaggtgtggatttgcccgctggcgaacggg
cacatccaggccaccggccgtgatgcgcggcgtcggaagcaataccgctatcatcccgat
tggtcgtcggtgcgcgatggcgcgaagttcgagcgcacgatcgccttcgggcgggcgctg
ccgaaaatccgccagcacgtcgcccgcgatctcgcgcggcgccgcctcgaccgccgcaag
gtgctcgcggcgatggtgcgattgctcgagtcgaccttggtgagaatcggcaacgaggaa
tatgcgaaacagaatcgctccttcgggctgagcacgatgcgcgatcggcacgtgcggatc
ggacggggaacgctgcacttcgagtttcgcggcaagagcggcaagaaccaccagatcgac
ctgcacgatccgcgactcgccgagatcgtgcgacgcacgcaggaactgccgggccaggat
ctctttcaatatgtggacgacgacggcgagccgcaaaagatcgggtccgccgacgtgaac
gagtatttgcgcgagattgcgggcgaggagttttcggcgaaggatttccgcacgtgggcg
ggcacggtgctcgccgcgctggcgttgcgggaattgggcccgttcgcgaccaaggcggag
gcgaagcggaatcttgtgcaggcgatcgagcgcgtgtcgggccggctgggcaatactccg
gcggtctgcaagaaatgctacgtgcaccccgtcgtgctgcagagctacctcgacggcgtc
acgctggagcaggtgaaagccaaagcgggcgcggtgctggcttccgccgggcggaacggc
aacgcagggttgagcgcggaggagaaggcggtgctggcgttcctgcagcgcaagttgccg
accacggcggagcgcctagcgaagtcgatccggcaggaagcacgcaaacgcgggcgcggg
tcccgctga
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