Opitutus terrae: Oter_2092
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Entry
Oter_2092 CDS
T00689
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ote
Opitutus terrae
Pathway
ote03030
DNA replication
ote03430
Mismatch repair
ote03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Oter_2092
03430 Mismatch repair
Oter_2092
03440 Homologous recombination
Oter_2092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ote03032
]
Oter_2092
03400 DNA repair and recombination proteins [BR:
ote03400
]
Oter_2092
Enzymes [BR:
ote01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Oter_2092
DNA replication proteins [BR:
ote03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Oter_2092
DNA repair and recombination proteins [BR:
ote03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Oter_2092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
tRNA_anti-codon
T2SSK
DUF655
Motif
Other DBs
NCBI-ProteinID:
ACB75375
UniProt:
B1ZMU7
LinkDB
All DBs
Position
complement(2682538..2686353)
Genome browser
AA seq
1271 aa
AA seq
DB search
MPSADPNFVHLHVHSDYSLLDGSCRIDRLLKRTNELGMKAIALTDHGNLYGAIEFYKAAK
DAQVKPLIGCELYLVEHSRLEKHGRSDDDGKTIFHLGLLARNLTGYQNLLKLVSDAHLKG
FYYKPRTDIETLAKYAGGLIGFSGCLASLVPQHLLNDREDEARKACARFVEIFGRENYFI
ELQDHGIPEQRKIIPGLLDLAQEFKLQVICSNDVHYVNHGDAGPHDAMLCIQTGSKIDDE
KRMRFSGSQFYLKSREEMAQVFREVPASLTNTQLVADMCELAIPFPKGSERYPKYPLPPE
IKTDRGGYLQDLCVAGLRRRYGVDYFAAASHPAAAERLDKLTNLPAGEKPQPPDYTGLTH
EEELVVRMGYELSIIRVTGFIDYFLVVWDFIAWAKSHGVPVGPGRGSGAGCLVAYLLGIT
NLDPLRFKLLFERFLNPERVSPPDFDIDFCMRRREEVINYVREKYGKDCVANIITYGTLG
AKMVIRDVSRVHNLPFAEADRLAKMIPDELNITLTDAIAKSAELSSEIARNPVAKKIVDQ
ALVLEGMVRNTGKHAAGIIITDQPLDDFVPLTLQEGDVTVQFDMGAVTKLGLLKMDFLGL
KTLTVIADAVDNVRRTADPKFDIETIPLDDPKTYAMLNAGKTVGVFQLESSGMQSACKQV
GVSNIDDINAICALYRPGPMQFIPDYARGKKDPSTVEYPHPLLEQSLQETYGIIVYQEQV
MECAKIIAGYTLGGADMLRRAMGKKDAEAMAKERVKFVEGAKRVNAIDEKKANEIFDLLN
KFASYGFNKSHSAAYALVSYQTAFLKANYPVQFMAAVLTAELGNAEKVSHFIAEAEAMGI
TVLGPDINESREMFTPVLRGASSPRAQSPESRVQSQADSELSALNSQLSAAEADRAGGAI
RFGLAGIKGVGELAAQKIIEERDKNGAFCDFDDFAARMDGRAVNKRVLEHLVKTGAFDYS
GAPRKPLFDGIDAALATVAARARDRAAGQHSFLDMFAEDLAPKKNGKNGSNGHGAATPSS
RPASGSDFSTLDSQLSTSSDDFTSTERLTFEKELLGFYVSGHPLNVFAGLTEAIDTYPIT
ELLNQGDRTEFRLCGIVSGIAKRLSKKDNRPWASFTLATKAGALPLNMFADGYANYGTVL
AENALVLVQGNIIVNQEGARVNVKECYPLENQIAGLVRKVTWLLRPAHPELAGFFHQLRA
TLDKQSGDTRLELGFAFPNRFAPCAEISTALTWKVNGPSFQALRSHPAVAGVQIETRRLE
LKQDRRWAKRG
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtcagcggatccgaatttcgttcatctccacgtccacagcgactatagcctgctc
gatggctcctgccgcatcgaccggctgctgaagcgcacgaacgagctggggatgaaggcg
attgcgctcaccgatcacggcaatctctacggtgcgatcgagttctacaaggccgccaag
gacgcccaggtcaaaccgctcatcggttgcgagctctacctggtcgaacattcccgcctc
gagaaacacggtcgctcggacgacgacggaaagacgattttccacctcgggctgctggcg
cgaaatctcaccggctatcagaatctgctgaagctcgtctccgacgcgcacctcaagggc
ttctattacaagccgcgcacggacatcgaaacgctcgcgaaatacgcgggcgggctcatc
ggcttctccggctgcctcgcctcattggtgccgcagcacctgctcaacgatcgcgaggac
gaagcccgcaaggcctgcgcacgcttcgtcgagatcttcggccgcgaaaactacttcatc
gaactgcaggaccacggaatcccggaacagcgcaagatcatccccggcctgctcgacctg
gcgcaggaattcaagctgcaggtcatctgttcgaacgacgtccactacgtgaaccacggc
gacgccggtccgcacgacgcgatgctctgcatccagaccggctcgaagatcgacgacgag
aaacggatgcgcttcagcggctcgcagttttatctgaagtcgcgcgaggaaatggcccag
gtgttccgcgaagtgcccgcgtcgctcacgaacacccagctcgtggctgacatgtgcgag
ctcgcgatcccgtttcccaaaggcagcgagcgctatcccaaatatcccctgccgcctgag
atcaaaaccgaccgcggcggctacctccaggatctctgcgtcgccggtctccgccgccgc
tatggcgtcgactacttcgccgcggcctcgcatcccgccgccgccgaacgactcgacaaa
ctcaccaacctgcccgccggcgaaaagccgcaaccgcccgactacaccggactcacccac
gaggaagagctcgtcgtccggatgggctacgagctgtcgatcatccgcgtcaccgggttc
atcgactacttcctcgtcgtttgggatttcatcgcctgggccaaaagccacggcgtgccc
gtcggcccgggccgcggctccggcgccggctgcctcgtcgcctacctgctcggcatcacc
aacctcgacccgctccggttcaagctgctgttcgagcgcttcctcaatcccgaacgcgtc
tcgccgccggatttcgacatcgatttctgcatgcgccggcgcgaggaggttatcaactac
gtccgcgaaaaatacggcaaggactgcgtcgcgaacatcatcacttacggcacgctcggc
gcgaagatggtgatccgcgacgtctcgcgcgtgcacaacctgccgttcgccgaggccgac
cgcttggcgaagatgatccccgacgagctcaacatcacgctcaccgacgcgatcgccaaa
tccgccgagctcagctccgagatcgcgcgcaatcccgtcgcgaaaaaaatcgtcgaccag
gcgctcgtgctcgagggcatggtgcgcaacaccggcaagcacgccgccggcatcatcatc
accgaccagccactcgacgacttcgtcccgctcacgctgcaagaaggcgacgtcaccgtg
cagttcgacatgggcgcggtgaccaagctcgggctgctgaagatggattttctcgggctg
aagacgctcaccgtcatcgccgacgcggtcgacaacgtccgccgcaccgccgatccgaag
ttcgacatcgagaccatcccgctcgacgacccaaagacctacgcgatgctcaacgccggc
aagaccgtcggcgtcttccagctggaatccagcggcatgcagtcggcgtgcaagcaggtc
ggcgtctcgaacatcgacgacatcaacgcgatctgtgcgctctaccgacccggcccgatg
cagttcatccccgactacgcccgcggcaagaaggacccgagcaccgtcgagtatccgcat
ccgctgctcgaacagtcgctgcaggagacctacggcatcatcgtttaccaggagcaggtg
atggagtgcgcgaagatcatcgccggctacacgctcggcggcgccgacatgctccgccgc
gcgatgggcaagaaggacgcggaagcgatggcgaaagaacgcgtgaagttcgtcgagggc
gccaagcgcgtgaacgctatcgacgagaagaaggcgaacgagattttcgacctactcaac
aagtttgccagttacggcttcaacaagtcgcactccgccgcctacgcgctcgtcagctat
caaaccgcgttcctcaaggccaactacccggtgcagttcatggccgccgtgctcacggcc
gaactcggcaacgcggaaaaggtctcgcacttcattgctgaagccgaggcgatgggcatc
accgtgctcggccccgacatcaacgagtcgcgcgaaatgtttacgccggtccttcgcggc
gcatcctcgccgcgagcccagagcccagagtccagagtccagagccaggcagattcggag
ctctcagctctcaactctcagctctcagctgccgaagcggatcgagccggcggcgcgatc
cgcttcggactcgccggaatcaagggcgtcggtgagctcgccgcgcagaagatcatcgag
gagcgcgacaagaacggcgcgttttgcgacttcgatgacttcgccgcacggatggatggt
cgtgccgtcaacaagcgcgtgctggagcatctggtgaagaccggcgccttcgactacagc
ggcgcaccgcgcaagccgctcttcgacggcattgacgccgcgctcgccaccgtcgccgcc
cgggcccgcgatcgcgctgccggccagcacagtttcctcgacatgttcgccgaggacctc
gcgcccaagaaaaacggcaagaatggctcaaacggccatggagccgcgacgccctcgtcg
cggccggcttccggctccgacttctccactctcgactctcaactctcaacttcttcggac
gacttcacctccaccgagcggctcaccttcgaaaaggagctgcttggtttctacgtctcc
ggacatccgctcaacgttttcgctgggctgactgaagcgatcgacacctatccgatcacc
gaactgttgaatcagggcgaccgcacggaatttcggttgtgcggcatcgtgtccggcatt
gccaagcggctctcgaaaaaagacaaccgcccgtgggccagcttcacgctcgcgacgaaa
gcgggggcgctgccgctgaacatgttcgccgatggctacgcgaactacggcacggtgctc
gcggaaaacgcgctcgtgctggtgcagggcaacatcatcgtcaaccaggagggcgcgcgg
gtgaacgtaaaggaatgctacccgctcgagaatcagatcgccgggctcgtccgcaaagtc
acctggctgcttcggccggcgcatccggaactcgccggcttcttccaccaactgcgcgcc
acgctcgacaaacagtcaggcgatacgcgattggagctggggttcgccttcccgaatcgg
ttcgcgccctgcgccgagatcagcaccgcgctgacgtggaaggtgaacggcccgtcgttc
caggcgcttcgctcgcatccggccgtcgcgggcgtgcagatcgagacccgtcggttggag
ctgaagcaggaccgccgctgggccaagcgcgggtaa
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integrated database retrieval system
