Opitutus terrae: Oter_2372
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Entry
Oter_2372 CDS
T00689
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ote
Opitutus terrae
Pathway
ote03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Oter_2372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ote03400
]
Oter_2372
Enzymes [BR:
ote01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Oter_2372
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Oter_2372
DNA repair and recombination proteins [BR:
ote03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Oter_2372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
CdrL_M
Motif
Other DBs
NCBI-ProteinID:
ACB75654
UniProt:
B1ZQP2
LinkDB
All DBs
Position
complement(3065001..3065864)
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AA seq
287 aa
AA seq
DB search
MPELAEVEFFRKRWDHAARGRRVTAVRLHPHAKIFRGTSPSTLRHALTGAVLESSDAAAK
QMLFRFSDEIWLGVHLGMSGELRVEPAGCPAGRHDHLVLDTAKHALVFNDPRMFGRVLLH
RGAEPPVWWTKIAPPILSAAFTPAAVREFLHRRGRAPIKAVLLMQERFPGIGNWMADEIL
WRAGIHPRTAAGSLTEAQSKTLWREARHVCRMALDTIAGRGRSLPRDLNVNIPDTWLFHH
RWQPGGRCPRTGVLLERAEIGGRTTCWSPARQPAPPRAPRPRPAARS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctcgccgaagtcgagtttttccggaagcgctgggaccacgctgcgcgcggc
cgtcgcgttacggccgtgcggctgcatccgcacgccaaaatcttccgcggcacgagtccc
tccaccctgcgtcatgcgctgaccggcgccgtgctggagtcgtccgacgcggcagcgaag
caaatgctctttcggttttcggacgagatctggctcggcgttcatctcggcatgagcgga
gagctgcgcgtcgagccggccggttgcccggcgggcaggcacgatcacctcgtgctcgac
acggccaagcatgcgctggtgttcaacgatccgcggatgttcggccgcgtgctgctacac
cgcggtgcagaaccgccggtttggtggacgaagatcgcgccgccgattttgtcggcggct
ttcacgcctgcagccgtgcgggagtttctgcatcgccgtggtcgtgcgccgatcaaggcc
gtgctgttgatgcaggaacgttttccgggaatcggcaactggatggccgacgagattctc
tggcgcgccggaatccatccgcgcacggcggcgggttcgctcaccgaagcccaaagcaaa
acgctgtggcgcgaggcgcggcacgtctgccggatggcactcgacacgatcgccggccgt
ggccgcagcctgccccgcgacctcaacgtgaatattcctgacacctggttgtttcaccac
cgctggcagcccggcggtcgctgcccgcgtaccggcgtgctgctggagcgcgccgagatc
ggcgggcggaccacatgctggtcgccggcacgccagcccgcgccgccccgcgcaccccgt
ccgcgccccgccgccaggtcatga
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