Opitutus terrae: Oter_2415
Help
Entry
Oter_2415 CDS
T00689
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ote
Opitutus terrae
Pathway
ote03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Oter_2415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ote03019
]
Oter_2415
03016 Transfer RNA biogenesis [BR:
ote03016
]
Oter_2415
Enzymes [BR:
ote01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Oter_2415
Messenger RNA biogenesis [BR:
ote03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Oter_2415
Transfer RNA biogenesis [BR:
ote03016
]
Prokaryotic type
tRNA degradation factors
Oter_2415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
KH_1
RNase_PH_C
PNPase
KH-I_KHDC4-BBP
KH_2
KH_Mug60-KHD4
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ACB75697
UniProt:
B1ZS98
LinkDB
All DBs
Position
complement(3108140..3110332)
Genome browser
AA seq
730 aa
AA seq
DB search
MNQKYSVTVPELGITFSTGSIAQLANGAVNVQVGETNVFVTACVAQTTKPGQDWFPLTVD
YREKYAAAGRFPGGYFKREGRPSEKEILTSRLCDRPCRPLFPEGFLNEVQIIGQLFSADL
VNESDISMVNGASAALAISDIPWNGPIAAVRVAEIEGKFVANPTIDQMFASSLDLIYVGN
EKDMLMIEGSADQIPEERFIEALAFGHESIQPILKAIKELVAQCGKPKGTFPLVGATPEA
RTIIERVVPTERLIEAIFGKEKAVRANAVKLLKEEAKAALTAELGEGKFTDVDLNVVFED
LQYKAYRKTVLERGVRADGRGQKDIRPLQAQVGVLPRVHGSAMFQRGDTQNIALTTLGPT
KDAQDLDALTGGVKSKSFLLHYNFPPFSVGETGRFTGPGRREIGHGALAERSLVPVLPPE
DVFPYSIRVVSEIMASNGSTSMASICGGCLSLMDAGVPIIAPVAGISCGLMTQNASDGSI
EKWVTITDILGEEDHFGDMDFKLAGTSKGITGFQLDLKINGLPFEIAKTAIMQARDARME
ILKVMLGSLPAPRADLSKYAPRIQTIQIDPEKIGLLIGPGGKTIRRITETTGAQIDIAED
DSGKVFVYSNNAEAMNRAIQEIDSLCGGGGPGGSKGPAIEVGKIYTGRVTGVKEFGCFVE
CTPGNEGLCHVSELADFRVRRTEDVVKMGDSITVKCIGIDERSGKVRLSRKAAMKELEAQ
KQSSEAAPAQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaaatactccgtcacggtccccgagttggggatcacgttctccaccggctcc
atcgcccagctcgccaacggcgccgtcaatgtccaggtcggcgagaccaacgtgtttgtt
accgcctgcgtcgcgcagaccaccaagccgggccaggattggttcccgctcacggtcgac
taccgtgaaaaatacgccgccgccggccgcttccccggtggttacttcaagcgcgaaggc
cgtccgtcggaaaaggaaatcctcacctcccggctctgcgaccgtccgtgccgcccgctc
ttccccgagggtttcctcaatgaggtccagatcatcggccagctgttctccgccgatctg
gtcaacgaatccgacatctcgatggtcaacggcgccagcgccgcactcgccatctccgat
attccgtggaacggcccgatcgcggccgtccgcgtcgccgaaatcgaaggcaagttcgtc
gccaacccgaccatcgaccagatgttcgcctcgtcgctcgacctgatctacgtcggcaac
gaaaaggacatgctgatgatcgaaggctccgcggaccagatcccggaagagcgcttcatc
gaggcgctggcgttcggccatgagtcgatccagccgatcctcaaagccatcaaggaactc
gtcgcccagtgcggcaagccgaagggcacgttcccgctcgtcggcgccacgcccgaggcc
cgcaccatcatcgagcgcgtcgtcccgaccgagcggctgatcgaagcgatcttcggcaag
gaaaaggccgtccgcgccaacgccgtgaagctgctcaaggaagaggccaaagcggcgctc
accgccgaactcggcgaaggcaagttcaccgacgtcgacttgaacgtcgtgttcgaggat
ctccaatacaaggcctaccgcaagacggtgctcgaacgcggcgtccgcgccgacggccgc
ggccagaaggacatccgtccgctgcaggcgcaggtcggcgtgctcccgcgcgtgcacggc
tccgccatgttccagcgcggtgacacgcagaacatcgcgctcaccacgctcggtcccacc
aaggatgcgcaggatctcgacgccctcaccggcggcgtgaagtcgaagtcgttcctgctc
cactacaactttccgccgttctccgtcggcgaaaccggccggttcaccggtccgggccgt
cgcgaaatcggccacggcgcactcgccgagcgttcgctcgtcccggtgctaccgcccgag
gatgtgttcccctactcgatccgcgtcgtgtccgagatcatggcctccaacggctcgacc
tcgatggcctcgatctgcggcggctgtctgtcgctgatggacgccggcgtgccgatcatc
gcgcctgtcgcgggcatctcctgcggtctgatgacccagaacgcttccgacggctcgatc
gagaagtgggtcacgatcaccgatattctcggtgaggaagaccacttcggcgacatggac
ttcaagctcgccggcaccagcaagggcatcaccggcttccagctcgacctcaagatcaac
ggcctgcctttcgagatcgcgaagaccgccatcatgcaggcacgcgacgcccggatggaa
atcctcaaggtcatgctcggctcgctgcccgcgccgcgcgccgatctcagcaagtacgcc
ccgcgcatccaaacgatccagatcgatccggaaaagatcggcctgctcatcgggcccggt
ggcaagacgatccgccgcatcaccgagacgaccggtgcgcagatcgacatcgccgaggac
gactcgggcaaggtgttcgtttactcgaacaacgccgaggcgatgaaccgcgccatccag
gagatcgactctctctgtggcggcggcggtcctggcggcagcaagggccccgcgatcgag
gtcggcaagatctacaccggccgtgtgaccggcgtgaaggagttcggctgcttcgtcgag
tgcacccccggcaacgagggcctgtgccacgtgagcgagctggccgacttccgtgtccgt
cgcactgaggacgtggtgaagatgggcgattcgatcacggtgaagtgcatcggcatcgac
gagcgttccggcaaggttcgcctcagccgcaaggccgcgatgaaggaactcgaagcgcag
aagcagagcagcgaagccgctcccgcgcagtaa
DBGET
integrated database retrieval system
