Opitutus terrae: Oter_2792
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Entry
Oter_2792 CDS
T00689
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ote
Opitutus terrae
Pathway
ote03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Oter_2792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ote03400
]
Oter_2792
Enzymes [BR:
ote01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Oter_2792
DNA repair and recombination proteins [BR:
ote03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Oter_2792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Helicase_C
ResIII
PriA_CRR
AAA_30
RUBY_RBDX
HypA
zinc-ribbons_6
DUF2321
Motif
Other DBs
NCBI-ProteinID:
ACB76073
UniProt:
B1ZW59
LinkDB
All DBs
Position
3565482..3567719
Genome browser
AA seq
745 aa
AA seq
DB search
MIVGVHPLAGFDKLLHYKVPDPMRDAVQVGSLVRVPVLRTMRLGIVGEIGVPKDFPVEKL
KAVVEVLHPFPALTPELLQLARWMAGYYACGVDSVIETMLPAAVRRGATVKHEKSLALVR
RLTPDELTVLEKKAPQQARLYRLLAQQFRPQLKSLVLSRLGVTAAVATALIKRGFVREEL
RRVERVAYADDFAHGELVAAQPHTLNPEQAAVVADLESRLGEQKFGVALLHGVTGSGKTE
VYLRGIDTTLKAGGGVLFLVPEVALTPQTVARLRSRLEAIAPGHRCVVWHSHLSDGERFD
GWLALATGEARIVVGARSAVFAPVANLRLIIVDEEHEPAYKQDETPRYHGRDVAVMRAKL
TGAFCVLGSATPSLESFANALAGKYRLLTLTQRVDNRQLPNIDVVDLRIEAMKHRSLTAL
SDKLVNAMQARFERREQTILFINRRGYSSSMLCTKCGHVEECPHCSIAMTYHRADEMLRC
HLCGEQKAAPARCPQCGAPDIRWRGLGTQRVEEAVRRVLPRARIERMDTDAMAKKNRFRE
VLSQFRAGKIDVLVGTQMIGKGLDFPNVTLVGLIDADMSMHIPDFRANERTFQLLVQVAG
RAGRGDRAGDVVVQTFTPQAEAIQFSRRADFAGFAESELKLRKEFHYPPYRHLIHHLFRG
PNPEKLKFFAEQWARLVEKELGQIVELRGPSASPIEKIKDEYRWQLWYFTHAVIKVVPAL
AKLRAGFAWPDDITQVLDVDPVNLM
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcggcgtccatccgctcgcggggttcgacaagctcctgcactacaaagtcccc
gacccgatgcgggacgccgtgcaggtgggctcgctcgtgcgcgtgccggtgctgcgaacg
atgcgactcggaatcgtgggcgagatcggcgtgccgaaagattttcccgtcgagaaactc
aaggccgtcgtcgaggtgctgcatccgtttcccgcgctcaccccagagctgctgcaactc
gcgcgctggatggccggctactacgcgtgcggcgtggacagcgtgatcgagacgatgctg
ccggcggcggtgcgccgcggcgcgaccgtcaaacacgagaaatcgctcgcgctggtgcgg
cggcttacgccggacgagctcaccgtgctggagaagaaagcgccgcaacaggcgcgactc
tatcggctgctcgcgcagcagttcaggccgcagctgaaatcgctcgtgctgtcgcggctc
ggcgtcaccgcggcggtggcgacggcactgatcaagcgcgggttcgtgcgcgaggagctg
cggcgcgttgaacgcgtggcgtatgcggacgatttcgcgcacggcgaactcgtcgccgcg
cagccgcacacgctgaatcccgagcaggcggcggtcgtggcggatctcgagtcacggctc
ggcgaacagaagttcggcgtggcgctgctgcacggggtgaccggatcggggaagacggag
gtttacctgcgggggatcgacacgacgctgaaagccggcggcggcgtgctgtttctcgtg
ccggaggtggcactcacgccgcagaccgtcgcgcggctgcgctcacggctcgaggcgatc
gcgcccgggcatcgttgcgtcgtgtggcacagtcacctgagcgacggtgaacggttcgac
ggctggctcgcgctcgcgaccggcgaggcgcgaatcgtggtgggcgcgcggtccgcggtg
ttcgcgccggtcgcgaacttgcggctgatcatcgtcgatgaggagcacgagccggcctat
aaacaggacgaaacgccgcggtatcacggccgcgacgtggcggtgatgcgggcgaagctg
accggcgcgttctgcgtgctcggctcggccacgccctcgctcgaaagcttcgccaacgca
ctcgccggcaaatatcgattgctcacgctgacgcagcgcgtcgacaaccggcagctgcct
aacatcgacgtggtcgatctccggatcgaggcgatgaagcaccgcagcctgacggcgctt
tcggacaagttggtgaacgcgatgcaggcccgcttcgagcggcgcgagcagacgatcctg
ttcatcaatcgccgtggctattcctcgtcgatgctgtgcacgaaatgcgggcacgtggag
gagtgtccgcattgtagcatcgcgatgacgtatcaccgcgccgacgagatgctacgctgc
catttgtgtggcgaacagaaggcggcgccggcgcggtgtccgcaatgcggggcgccggac
atccgctggcgtggactcggcacgcagcgggtggaggaggcggtgcgacgggtgctgccg
cgggcgcgcatcgagcggatggacacggatgcgatggcgaagaagaaccggttccgcgag
gtgctgagccagtttcgcgccggcaaaatcgacgtgctggtgggcacgcagatgatcggc
aaggggctcgatttcccgaacgtgacgctggtcggcttgatcgatgcggacatgtcgatg
cacattccggattttcgggcgaacgaacggaccttccagctgctggtgcaggttgcgggg
cgcgcgggccgcggcgatcgcgcgggcgacgtggtggtgcagacgttcacgccgcaggcg
gaggcgatccagttttcacggcgggcggatttcgcgggattcgccgaatcggagctgaag
ctgcggaaggaatttcactatccgccttaccggcatctgatccatcacctgtttcgcggg
ccgaacccggagaaactgaaattttttgcggagcagtgggcacggctcgtggaaaaggaa
ctcgggcagatcgtggagttgcgtgggccgtcagcctcgccgatcgaaaagatcaaggat
gagtaccgctggcagctgtggtatttcacgcacgcggtgatcaaggtggtgccggcgctg
gcgaagctgcgcgcgggcttcgcgtggcccgacgacatcacgcaggtgctcgatgtcgat
ccggtgaacttgatgtag
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