Opitutus terrae: Oter_2830
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Entry
Oter_2830 CDS
T00689
Name
(GenBank) H+transporting two-sector ATPase alpha/beta subunit central region
KO
K03628
transcription termination factor Rho
Organism
ote
Opitutus terrae
Pathway
ote03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Oter_2830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ote03021
]
Oter_2830
03019 Messenger RNA biogenesis [BR:
ote03019
]
Oter_2830
Transcription machinery [BR:
ote03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Oter_2830
Messenger RNA biogenesis [BR:
ote03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Oter_2830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Spore_III_AA
AAA_25
AAA_22
ATPase_2
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ACB76111
UniProt:
B1ZX59
LinkDB
All DBs
Position
complement(3612727..3613965)
Genome browser
AA seq
412 aa
AA seq
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MEKKNASAPVDTPAPENAAADTAPSPDAARSAVATAPAPAPVETIQVEGVLDIDLQRGGN
GQLIDISRGGKRRPTDPFVPKELIRRFKLKQGSMIGGTAFPPDGRFPNPKMRFIETVDGI
PLEERRGKFEFTTLTTISPNQHLKMEMKDGRMTTRAVDLFCPIGKGTRGLIVAPPRTGKT
TLLRDMALGVLENNPECFVMILLVDERPEEVTDFKRSVPAEVWASSNDEQIENHLRIADL
CIERAKRLVEVGRDVVLFLDSITRLARAHNTARNSGRTGSGGLDVRALEKPRQLFASARK
TEEAGSLTIIASVLVETGSRMDDVIFQEFKGTGNMELVLDRKCAEMRLWPAINVAASGTR
KEELLIDAKTLEGIHFFRRALVQQKIEESTETMIARLSKTKTNAEFLKLIQR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaaaacgcgtccgcccccgtggacacccctgcgccggaaaacgccgccgct
gatactgccccctctcctgacgctgctcgctccgcggtcgcgaccgcgccggcccccgct
ccggtcgaaacgatccaagtcgagggcgtcctcgacatcgacctccagcgcggcggcaac
ggccagttgatcgacatcagccgcggcggcaaacgccgcccgaccgacccctttgtcccg
aaagaactcatccgccggttcaagctgaaacagggttcgatgatcggcggcacggcgttc
ccgcctgacggccgttttccgaacccgaaaatgcggtttatcgaaaccgtcgacggcatc
ccgctcgaggaacgtcgcgggaagttcgagttcaccacgctgacgaccatctcgccgaat
cagcacctgaagatggaaatgaaggacggccgcatgaccacccgcgccgtcgacctgttc
tgcccgatcggcaagggcacgcgcggcctgatcgtcgcgccgccccgcaccggcaagacc
accctgctccgcgacatggcgctgggcgtgctggagaacaatcccgagtgcttcgtcatg
atcctgctggtcgacgagcgcccggaggaagtcaccgacttcaagcgcagcgtgcccgcc
gaggtgtgggcttcgtccaatgacgagcagatcgaaaatcacctccggatcgcggacctt
tgcatcgagcgcgccaagcggctcgtcgaggtcggccgcgacgtcgtgctgttcctcgat
tcgatcacgcggctcgcgcgcgcgcataacacggcacgcaacagcggtcgcaccggctcc
ggcggcttggacgtccgcgcgttggaaaaaccgcgccagctcttcgcctccgcgcgcaag
accgaggaagccggctcgctcaccatcatcgcctccgtcctggtcgagaccggcagccgg
atggatgacgtgattttccaggagttcaaaggcaccggcaacatggagctcgtgctcgat
cgcaagtgcgccgagatgcggctctggcccgcgatcaacgtcgcggcctcgggcacccgc
aaggaagagctcctgatcgacgcgaagacgctcgaggggatccatttcttccgccgcgcg
ctggtgcagcagaagatcgaggagtcgaccgaaacaatgatcgcgcgactctcgaagacg
aaaaccaacgccgagttcctgaagctgattcagcggtag
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