Opitutus terrae: Oter_3087
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Entry
Oter_3087 CDS
T00689
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ote
Opitutus terrae
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ote03019
]
Oter_3087
Messenger RNA biogenesis [BR:
ote03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Oter_3087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
ACB76367
UniProt:
B1ZZG4
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All DBs
Position
complement(4021639..4022631)
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AA seq
330 aa
AA seq
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MSDDLCLSCIRDLKHFTTSDNGRTFSSLVVIKKLAAKTASNGNTFYSVEIGDRTGSCSCT
VFGDSPVFEVLKSGGEGAVIRVEGKIDFYQGRLSPKLARASVLSEEELGAPGLLDSLVEV
APENPEGLWAEISAFIDGIAQPELRATVRGVFDEIGDSFRWAPAAVSMHHAYRHGLLEHT
THMARACRALLPLYPEVDPDLAMAGILLHDTGKTIEYEGTLATKRSRRGILQGHVVLGYQ
LARKAAMKAKLPADLLERLEHIILSHQGEPEWGAAVYAATPEAVFVSMIDNLDAKMGMVQ
RALRQSNETDEFSERLPGLNGPLLTKKIPR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacctctgcctctcctgcattcgcgacctcaagcacttcaccacctcggac
aacggccgcacgttctcgagcctggtcgtcatcaagaagctcgcggcgaagaccgcttcg
aatggaaacaccttttacagcgtggagatcggcgatcgcaccggctcgtgctcgtgcacc
gtctttggcgacagcccggtcttcgaagtgctcaaaagcggcggcgaaggcgccgtgatt
cgcgtcgaggggaaaatcgatttctaccaaggacggctgtcgccgaagctcgcgcgagcc
tccgtcctgtccgaggaggaactcggcgcgcccggtttgcttgacagcctcgtcgaggtc
gcgcccgaaaatcccgagggcttgtgggcggagattagcgccttcatcgacggtatcgcg
caacccgaactgcgcgcgaccgtgcgcggcgtgtttgacgaaatcggcgactcctttcgc
tgggcgcccgcggcggtgtcaatgcaccacgcttatcggcacggtttgctggagcacacg
acgcacatggcgcgcgcttgccgggctctgctgccgctctatcccgaggtggatccggat
ctcgcgatggcgggcattctgcttcacgacaccggcaagacgatcgaatacgagggcacg
ctcgccacgaaacggagccgtcgcggcattctccagggtcacgtggtgctcggttaccag
ctcgcccgcaaggcggcgatgaaggcgaaacttccggccgacctgctggagcggctcgag
cacatcattctctctcatcaaggcgaacccgaatggggcgcggccgtctacgccgccacg
ccggaagcggtgttcgtgtcgatgatcgacaacctcgacgcgaagatgggcatggtgcag
cgcgcgctccgacaatcgaatgaaaccgatgaattttccgagcgcctgcccggtctcaac
ggtccgctgctgacgaagaaaattccgcgctga
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