Opitutus terrae: Oter_3470
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Entry
Oter_3470 CDS
T00689
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ote
Opitutus terrae
Pathway
ote03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Oter_3470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ote03000
]
Oter_3470
03400 DNA repair and recombination proteins [BR:
ote03400
]
Oter_3470
Enzymes [BR:
ote01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Oter_3470
Transcription factors [BR:
ote03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Oter_3470
DNA repair and recombination proteins [BR:
ote03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Oter_3470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ACB76747
UniProt:
B1ZV80
LinkDB
All DBs
Position
4514605..4516176
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AA seq
523 aa
AA seq
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MVASRATTPISPAVVSPTHRLRLSPAQMYARVLAGDPAWNGHFFTGVLTTGIYCLPSCKA
RKPKRENVRFFPTCEAARAAGLRPCKKCHPDDFARGADPVLESVEQLVAEMRANPAAFSE
ARALVRRLGFGVTRTFELLRLHYHTTPAELLTRARIAAAQQQLLAGATPLADIAYSVGFD
ALSVFHENFRRLTGLTPARYRELPHARSFELTLPDGYLLGYLRRALSRDAQSVSERLEGD
VYTAAVNLSGGPALLTLRLNPSPVRVEVIPAAGGTGVPPVGSRPPTKGERVPDVASGVPT
NTLEAHAIAIGLLGLEDDASSFARLARKLGLARLVAGRSELRISRIPSVFDGLVWAIIGQ
QINFSFACVLKRRLTELAGTRLSNGLMAPPTPTAIARLEPDELVPLQFSRQKAGYLITTA
RAITAGELDLAQLPSMSASRAERTLLALHGFGPWSVNYVMMRALGFADCVPLGDTGVTSG
LQSLLHLEQRPDVDATRRLMAVFSPHRSLATAHLWQLNLPRPT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgtcgcgtgccacaactcccatatctcccgccgtggtttcgcccacccatcgg
ctccgcctttcgcccgcccagatgtatgcccgcgtgctcgccggcgacccggcgtggaac
ggccattttttcacgggcgtgctcaccacgggcatctactgcctcccatcctgcaaggcg
cgcaaacccaaacgggagaacgtgcgcttttttccgacgtgtgaagccgcgcgcgccgcc
ggattgcgtccgtgcaagaaatgccaccccgacgattttgcccgcggcgcggatcccgtg
ctcgaaagcgtcgagcagctcgtggccgaaatgcgggccaacccggcggcgttttcggag
gcgcgtgcgctcgtgcgccggctggggttcggcgtcacccgcacgttcgaactgctccgg
ctgcactatcacaccacgcccgccgagttgctcacacgcgcgcgcatcgccgccgcccag
cagcagctgctcgccggggcaacgccgctggccgacatcgcgtacagcgtcggtttcgat
gccctctccgttttccacgaaaacttccgccggctgaccgggctcacgccggcgcgctat
cgtgagctaccccatgcccggagcttcgagctgacactgcccgacggctacctgctcggc
tacctgcgccgcgcgctcagccgggatgcgcaaagcgtgagcgagcggctcgaaggcgac
gtctacaccgccgccgtgaatctgtcgggcgggccggcattgctcaccctgcgcctcaac
ccttcgcccgttcgcgtcgaggtcattccggctgcgggtggcacgggcgtcccgcccgtg
ggttcgcgcccgcctacaaaaggcgagcgtgtgccggacgtcgcaagcggcgtccctacc
aacacgctcgaggcccatgcgatcgcgatcggactgctcgggctcgaggatgacgcgagc
tcgttcgcgcggctcgcgcgcaagctcggtttggcgcggctcgtcgccggtcggagtgaa
cttcgcatcagccgcattccctccgtgttcgacggactcgtctgggcgatcatcggccag
cagatcaacttcagcttcgcctgcgtgttgaaacgccggctgaccgagctcgcgggcacg
cggctgtccaacggactgatggcgccgccgacgccgacagcgatcgcgcggctcgagccg
gacgagctcgtgcccctgcagttctcgcgccagaaagcaggctacctgatcaccaccgcg
cgggcaatcaccgcgggcgaattggatcttgcgcagctcccctcgatgtccgccagccgc
gcggagcgcacgctgctcgcgctgcacgggttcggcccgtggtcggtaaactacgtgatg
atgcgcgcgcttgggtttgccgactgcgtgccgctcggcgacaccggcgtgaccagcggg
ctgcaatccctcctccacctcgagcaacggcctgacgtcgacgccacgcggcggctgatg
gccgtgttctctcctcaccgcagcctcgccacggcgcacctgtggcaactcaacctcccc
cggcccacatga
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