Ornithodoros turicata (relapsing fever tick): 135366610
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Entry
135366610 CDS
T11155
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
oti
Ornithodoros turicata (relapsing fever tick)
Pathway
oti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135366610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oti03041
]
135366610
Enzymes [BR:
oti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135366610
Spliceosome [BR:
oti03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
135366610
Complex B
135366610
Complex C
U2 SnRNP specific factors
135366610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
CBM46
Motif
Other DBs
NCBI-GeneID:
135366610
NCBI-ProteinID:
XP_064455461
LinkDB
All DBs
Position
8:complement(19409963..19427209)
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AA seq
794 aa
AA seq
DB search
MYHKGGGGRPRGFGFEGFNVAAKKSDPQLGQSALPPESTPSPSLPVINRRGYTGLTTITQ
NAMDINYGNLRKRPKTEEEYFDQDDEDDKKGQLAYQPAPGSPSWNESCGNRNQHSSDSEE
DPLDAFMAGIEKKLKSDSAKPIRGGREKDITKEKDTKGVRDDIENEDDEESYYRYVEENP
NAAAADDTSDVEIEYDEDGNPIAPLKSKYIDPLPPIDHSQIEYKEFSKNFFDEPEDIARL
TAAEVEDLRQKLGVKVTGACAPKPITSFAHFGFDEQLMKAIRKSEYVQPSPIQAQGVPIA
LSGRDMIGIAKTGSGKTAAFIWPMLVHIMDQRELLPGEGPIGLILAPTRELAQQIYLEAK
RFGKVYNITAVCCFGGGSKWEQSKALEEGAEIVVATPGRMIDMIKMKATNLERVTMLVLD
EADRMFDMGFEPQVRSICDHVRPDRQTLMFSATFKKKVERLARHALTDPIRVVQGDIGEA
NEDVMQLVLVMPPGSAKWTWLTSKLVELTSVGSVLIFVTKKANAEELATNLKTKDHRVGL
LHGDMDQNDRTKVIASFKRKEFPILVATDVAARGLDIPHVKTVVNYDIARDIDTHTHRIG
RTGRAGEKGLAYTLITEKEKEFAGHLVRNLEGANQGVPSALMDLAMQSSWFRKSRFKQEK
GKKLNIGGHGLGFRIRERPGLGAPPPQSRTQGPLAGMGSYAASVLSAPQFVASSDKGSAC
SAPQPSAKTTPGPQSDRLSAMRAAFQSQYKSQFQAATDTSWLKKQRVPDPPSDPRPDLTE
SAGSKRRKKSRWDV
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtatcataagggaggcggaggacggccgagaggcttcggctttgaaggcttcaacgtc
gcagccaagaaatctgaccctcagctcggccaaagtgctttgccgccagaaagcacccct
tcgccatcgttacctgtgattaatagacgtggctatacaggactgacgaccatcacgcaa
aatgctatggacattaactacggaaaccttcgaaagcggccaaagactgaagaggagtac
ttcgaccaagacgacgaggatgacaaaaaggggcaactggcctaccagccagcccctgga
agcccctcctggaacgaaagctgcggcaacagaaatcagcactcttcggacagcgaggaa
gatcctctggatgcctttatggcgggcattgagaaaaagctcaaaagtgacagtgcaaag
ccaattcgagggggcagagagaaagatataacaaaagagaaggacacaaagggtgtacgt
gacgacattgagaatgaggacgatgaagagtcgtactacaggtacgttgaagaaaaccca
aatgccgccgctgctgacgacaccagtgatgttgagatcgagtacgacgaagatggtaat
ccaattgctcccctcaagtccaaatacattgaccctttgccaccgattgaccactctcaa
atcgagtacaaagagttctctaagaacttctttgacgagccagaggacatcgcacggctg
acagcagctgaggttgaggaccttcggcaaaagcttggcgtgaaggtcacgggtgcgtgt
gccccaaagcccatcaccagcttcgctcattttggctttgacgagcagctcatgaaagcg
atacgaaagtctgaatacgtacagccgtcacccatacaagcacagggtgtaccaatagca
ctgagtggacgagacatgataggcattgcaaagactggttctggcaagactgcagcattc
atctggcccatgcttgttcacattatggatcaacgagaacttctgccaggcgaaggacct
atagggttgatcttggcccccacaagagagctggcgcaacagatatacctggaggccaag
cgcttcgggaaggtgtacaacataacagcagtatgctgttttggaggtggcagcaagtgg
gagcaatcaaaagcgctcgaagaaggagctgaaattgtagttgctactccaggtcgcatg
atcgatatgatcaagatgaaagccaccaacttggaacgagtcacgatgctcgttcttgac
gaggcagaccggatgtttgatatgggatttgaaccccaggtacggtcaatctgtgatcat
gtgagaccagacaggcaaacgctcatgttcagcgcaacgttcaaaaagaaagtggagcgc
ctcgcgcgtcatgctctaacagaccccatccgggtagtccagggggatatcggagaggca
aacgaggatgttatgcagctggtgttggttatgccaccaggatctgcaaagtggacctgg
ctcaccagcaagctggttgagctcacttcagtgggaagtgtgctgatatttgtcaccaaa
aaggccaacgcagaggagctagcgacaaatctcaagactaaagatcacagagtgggactg
ttgcacggtgacatggaccagaacgatcgtaccaaagttatcgcgtccttcaagagaaaa
gagtttcccattttagttgcaactgatgttgcagcacgaggtcttgacataccccatgta
aagaccgtcgtcaattacgacattgctcgtgacatcgacactcacacccatcgcattggt
cgaactggacgagcaggtgagaagggtctggcgtacactcttatcacagagaaggagaaa
gagttcgcgggccatcttgtccgaaacctggaaggagccaatcagggcgtaccttctgca
ctcatggacctcgctatgcaaagctcctggttcagaaagtcccgtttcaaacaagagaag
ggcaagaaactcaacattggcggtcatggtctcggctttaggatacgtgaacggccaggt
cttggagctcctccaccgcagtctcgtactcagggcccacttgctggaatgggtagctac
gcggctagtgtcctttccgcgcctcagtttgtcgcgtcctcggacaagggaagcgcctgc
tctgctcctcagccatctgcaaagaccactccaggcccacagtccgatcgtctatcagcc
atgcgagctgccttccaatctcagtacaaatcccagtttcaagctgcaaccgacacgtcc
tggctgaagaagcagagagtgccggatccaccatcggatcccaggccggacctgacggaa
tctgcgggatcgaagcgacgcaaaaagtcgcggtgggacgtctaa
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