Ornithodoros turicata (relapsing fever tick): 135368229
Help
Entry
135368229 CDS
T11155
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
oti Ornithodoros turicata (relapsing fever tick)
Pathway
oti03018
RNA degradation
oti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135368229
09123 Folding, sorting and degradation
03018 RNA degradation
135368229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oti03019
]
135368229
03041 Spliceosome [BR:
oti03041
]
135368229
Messenger RNA biogenesis [BR:
oti03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135368229
mRNA degradation factors
5'-3' decay
Lsm complex
135368229
Spliceosome [BR:
oti03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135368229
Complex C
U2 snRNP components
135368229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF5471
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
135368229
NCBI-ProteinID:
XP_064457451
UniProt:
A0A2R5LG58
LinkDB
All DBs
Position
9:complement(17236992..17238382)
Genome browser
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDTEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEATQSKP
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctactctttcttcaaatctctcgtgggaaaagatgttgttgtggagctgaaa
aacgacttgagtatatgcggtacgctgcattcagtggaccaatacctgaatatcaagctc
acagacatcagcgtcacggacacggagaagtacccccacatgctctccgtaaagaactgc
ttcatccgtggttccgtggttcgttacgtgcaacttcctgcggacgaagttgacacacag
ttgcttcaagatgcagcaagaaaggaggcaacgcaaagtaagccttga
DBGET
integrated database retrieval system
