Ornithodoros turicata (relapsing fever tick): 135368982
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Entry
135368982 CDS
T11155
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
oti Ornithodoros turicata (relapsing fever tick)
Pathway
oti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135368982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oti03019
]
135368982
03041 Spliceosome [BR:
oti03041
]
135368982
Messenger RNA biogenesis [BR:
oti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135368982
Spliceosome [BR:
oti03041
]
Complex B
Other components
Prp19-related factors
135368982
Complex C
135368982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135368982
NCBI-ProteinID:
XP_064458638
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Position
9:complement(41159428..41169469)
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AA seq
850 aa
AA seq
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MKITPEMLNEEDDQPYEEEIERNPFSVKHWMRYIEHKKDEPKDVINTIYERALKELPGSY
KIWYSYLRLRLKQVRDLCITDPAYEEVNGTFEKSLVFMHKMPRIWMDYCKFLTQQQKITR
TRKVFDRALRALPITQHHRIWPLYLEFVNMHNIKETAVRVYRRYLKLCPENAEEFVEYLK
KVGKLDDAAVLMADIVNKEDFVSKEGKSKHQLWNELCDLISKNPDKVHSLKVDAIIRGGL
RRYTDQIGQLWNSLADYYIRAGLFERARDIYEEAVRTVLTVRDFTQVFDAFAQFEESILC
AKMEQTSKARPTEEDDLDLELRLARFEDLMDRRPLLLNSVLLRQNPHNVHEWLKRVKLLE
GKPREIINTFTEAVQTIDPKLATGKLPSLWVAFAKFYEENEQIEDARIILEKATQVPYTK
VEDLAHIWCEWAEMELRHENHEGALKLMRRATAVPSRKVAYHDQNEPVQFRVYKSLKVWS
LYADLEESFGTFKTAKAVYDRIIDLRIATPQIIINYGLFLEENNYYEDAFKAYEKGIALF
KWPNVFDIWNTYLTKFLKRYNSLNSNGGSKLERARDLFEQCLEGCPAKYAKALYLLYAKL
EEEHGLARHAMAIYDRGCKAVLPEEQFEMFNVYIRKAAEIYGLTHTRQIYEQAIEVLQDD
KARDMCLRFAELERKLGEIDRARAIYAHCSQICDPRTTSNFWNTWKEFEVHHGNEDTVRE
MLRIKRSVQATYNTQVNFMTAQMLSATAREAAANAGTEEPKDTMKQLEAAARVLAEEARK
PGKDILFVRGGTTADEDNLAERSRTANPDEINIDDDDESDDDQRVEEVAVEQRLVPEEVF
GDLKKSSETA
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacccctgaaatgctaaacgaggaggatgaccaaccatacgaagaagagatt
gaacgtaatcctttttcggtcaaacactggatgagatacattgagcacaaaaaagacgaa
ccgaaagatgtcatcaacacaatttacgaacgagcactgaaagaacttcctgggagctac
aagatctggtacagctacctgaggctgcgattgaaacaagttcgggacctttgcataacg
gatcccgcttatgaagaagtgaatggaacattcgaaaaatccctcgtattcatgcataag
atgcctcgcatatggatggattactgcaagttcctcacgcaacagcagaagatcacgcgc
acacggaaagtttttgatcgtgcattgcgggcgttgccgatcacacaacatcatcgtata
tggccactgtatttagaattcgtgaacatgcacaacatcaaggagactgcagtcagagtt
tacagacgatatctgaagctttgccccgagaatgcggaggagtttgtagaatacctgaag
aaagttgggaagctcgatgatgctgcagtgttgatggccgacattgtcaacaaggaagac
tttgtgtcgaaagaagggaagtcgaagcatcagctttggaacgaactctgcgatttgatc
tcaaagaatccggataaagtgcactccctcaaagtggacgccatcattcgcggaggtctt
aggaggtacacggatcagattggtcagctgtggaattccctcgcggactactacatcaga
gctggactgtttgaaagggcaagggatatttatgaagaagccgtcagaacagtactcact
gtcagggacttcactcaggtgttcgatgcgtttgcccaatttgaagaaagcatcctctgt
gcaaaaatggaacagactagcaaagctcggccaactgaagaagacgacttggatctggag
ctgcgtttggcgaggtttgaagacctgatggatcggagacctctgcttttaaacagcgtt
ttgctccgccagaaccctcacaacgtccacgagtggctaaagagagtaaagttactcgag
ggcaaaccgcgggagatcatcaacaccttcacggaagctgtccaaaccatagacccaaag
ctagcaaccgggaagcttcccagcttgtgggtggcctttgccaagttctacgaggaaaat
gaacaaattgaggatgcacgcatcatcttggagaaagcgacgcaagtcccgtacaccaag
gtggaagatcttgcccacatctggtgtgaatgggcagagatggagcttcggcacgagaat
cacgaaggggctctgaagttgatgcggagagccactgccgttccatcccgtaaagttgcc
tatcacgaccagaacgaacctgtccaatttagagtgtacaaatcgctcaaagtttggtcc
ctgtatgcagatctggaagaaagctttggaacatttaagaccgcaaaagcagtctacgat
cgtatcatcgacttgaggatagcgacaccgcagatcatcatcaactatggcttgttcttg
gaggaaaacaactactatgaagacgcattcaaggcctacgagaaaggaatagcacttttc
aagtggcccaacgtctttgacatctggaacacatacctcacaaagtttctcaagcgctac
aacagtctcaattccaacggaggcagtaagctggagcgggcgagagatctcttcgagcag
tgtctggaaggctgtcccgcaaaatacgcgaaagccctgtacctgttgtatgcgaagttg
gaagaagaacacggtcttgcccgacatgccatggccatctacgaccgcggttgcaaggcg
gtgcttccggaagaacagtttgagatgttcaacgtgtacatccgcaaggcagcagaaatc
tacggactgactcacacgaggcagatctacgagcaggcaatcgaagtcctccaggacgac
aaagcccgagacatgtgcctgcgtttcgcggagctcgagaggaagctcggagagatcgac
cgcgctcgggcgatctacgctcactgtagccagatatgcgatccacgtacgacgtccaac
ttctggaacacgtggaaagagtttgaggtgcaccacgggaacgaagacacggtgagagag
atgttgaggatcaagaggagcgtccaggcaacgtacaacactcaggtcaacttcatgaca
gcgcaaatgctcagtgctacggcacgggaagctgcagccaatgctggaacagaagagcca
aaggacaccatgaaacagctagaggcagcagcaagagtattggctgaggaagccagaaaa
cccggaaaggatattctctttgtgagaggtggcaccactgcagatgaagacaacctggca
gagagaagcagaacagcaaacccagacgagatcaacatcgacgatgacgacgaatcggat
gacgaccaaagggtagaagaagtggctgttgagcagaggctggttcccgaggaagtgttt
ggagacctgaagaaatcatccgaaactgcttga
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