KEGG   Ornithodoros turicata (relapsing fever tick): 135375148
Entry
135375148         CDS       T11155                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
oti  Ornithodoros turicata (relapsing fever tick)
Pathway
oti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135375148
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oti03041]
    135375148
Spliceosome [BR:oti03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    135375148
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd PRP4 ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_DCAF4 Ge1_WD40 Beta-prop_SCAP WD_LRWD1 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_IFT140_1st eIF2A Beta-prop_WDR19_1st Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 135375148
NCBI-ProteinID: XP_064463941
UniProt: A0A2R5L501
LinkDB
Position
Unknown
AA seq 519 aa
MSDDEEITYVKRQKIVHYGSLEEKERQRLADQDAADEGSDDEPISMDLRAAIASGNINIS
DEYMEMEEEVVSKDKQQLLEEFERRKKARQINVSTDDTQVKATLRELGEPICLFGEGPAE
RRERLRHLLAQIGQDAIRRKQEEELQREREARREAAETTWYHESTQELRKCRVWIARYSL
PRARVRIAKSREEPQGALSDSQIHAKRQELYKTLRSVNISCSQIGDTRPISFCEFSPNSQ
MLATASWSGLCKLWSIPDCQHIRTLRGHNCNVGAIVFHPRSTGTLSSKSLNMASCSSDGV
VNFWNLESEEPISSLKGACPHRVSRVAFHPSGRFLACCVFDNSWRLVDLETEMEVLHQEG
HSKAVYDISFQCDGSLAATGGMDAFGRIWDLRTGRCIMFLDGHLKSVLSLSFSPNGYELA
TGSEDNTIKVWDLRQRKCEYTIPAHTNLVSRVIFEKKTGEYLVTTSYDNTIKIWSNPEWT
PIRNLSGHDGRIMGADISHNGKYLATSSFDRTFKLWMPE
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgtctgacgacgaggagatcacctacgtaaaaaggcagaagatcgttcactatggaagc
ttggaagagaaagagaggcagagattggcagatcaggatgctgctgatgaaggaagcgat
gatgaacccatcagcatggatctcagggctgccattgcttcgggcaatatcaacatatca
gatgagtacatggaaatggaagaggaagtggtcagcaaggacaaacagcagcttctagaa
gaatttgagagaagaaaaaaggcccgtcaaatcaatgtttctacggatgacacacaagtg
aaggccacactgagggaacttggagaacccatatgtctgtttggcgagggtccggcggag
agacgagagcgtctccgtcacctgctggctcagatcggtcaggacgccattagacggaag
caggaggaagagctgcagcgggagcgcgaggcaagacgggaagcggcagaaaccacctgg
taccacgagagcactcaagaactgcgcaagtgtcgtgtctggatagctcggtactcgttg
ccccgagcacgggtgcgcattgccaagtcgagagaggagcctcagggtgcactttcagac
tcgcagatacatgcaaagagacaggagctctataaaactctcaggtccgtgaacatcagc
tgcagtcagatcggggacacacggccaatctcattctgcgaattcagtcccaactcacaa
atgctggcgacggcatcatggagcggcctctgtaagctatggtccataccggactgccag
catataaggacactaagaggtcacaactgtaatgtgggagccatagtgtttcacccaagg
tcaaccggcacactttcatccaaatctctcaacatggcatcgtgttcatcagatggtgta
gtcaacttctggaacttggagagtgaggagcccatcagtagcttgaaaggggcgtgtcca
cacagggtctccagggttgcctttcatccatccggaaggtttctggcttgttgcgtcttc
gataactcatggcggctagtcgatttggagacagaaatggaggttcttcaccaagaaggg
cacagcaaagcagtttatgacatcagcttccagtgtgatggctctcttgctgctacaggt
gggatggacgcatttggtcgaatatgggacctccgcacaggacgttgcataatgttcctc
gacggtcacctcaagtccgtcctcagtctttcgttctctccaaacgggtacgaattggcc
accggaagtgaggataatacgatcaaggtgtgggacttgaggcagagaaagtgcgagtac
actattccagcacacaccaacctggtgtcgagggtaatctttgaaaagaagaccggagag
tatctcgtaacgacgtcctatgacaacacaataaagatttggtccaaccccgaatggact
cccatccgtaacctcagtggccacgacggaaggataatgggagccgacatttcccacaac
ggcaagtacctggccacatcgtctttcgaccggacgttcaagctctggatgccagagtga

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