KEGG   Ornithodoros turicata (relapsing fever tick): 135375249
Entry
135375249         CDS       T11155                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
oti  Ornithodoros turicata (relapsing fever tick)
Pathway
oti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135375249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oti03041]
    135375249
Spliceosome [BR:oti03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    135375249
 Complex C
   U5 SnRNP specific factors
    135375249
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EIPR1 NBCH_WD40 ANAPC4_WD40 WD40_RFWD3 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C PEP5_VPS11_N Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 135375249
NCBI-ProteinID: XP_064464053
LinkDB
Position
Unknown
AA seq 350 aa
MAGYGFYPMPDHSGALVPVKRPRNELTAHADQNKRLKLAELGRTSSLEAPIMLLTGHLGE
IYCGKFHPDGTYLSTCGFDRQIFFWNTLGECENFAVLSGHTGAILDMHFSTDGGLIFTAS
TDKSLGIWDTNVGVRIKRLRGHNSYVNCCHPARRGPQLVCSGSDDSTIKLWDSRKRTPVH
SFQENYQITAVTFNDTAEQIMSGGIDNQIKVWDMRKNAVLYKMAGHTDTVTGLCLSPDGS
YVLSNSMDNTLRIWDVRPFAPQERCVKILQGHQHNFEKNLLRCSWSPDGSQVAAGSADRF
VHVWDTTSRRVIYKLPGHNGSVNDVQFHPKEPIILSVSSDKQVYLGEIEK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggcaggttacggtttttatcccatgccggaccacagtggggccctggtacccgtaaaa
agacccaggaatgaacttactgcacacgctgatcaaaacaaacgtcttaagctagcggaa
ctaggacgcacatcaagccttgaagccccgatcatgttgctgacagggcacctgggcgaa
atatactgcggcaagtttcatccagacggcacgtacctttcaacgtgcgggtttgaccgg
caaatttttttttggaacacccttggcgaatgtgaaaattttgctgtgttgagcggtcac
acgggagcaattctagacatgcatttttcaactgacggcggtttgatattcacggcttcc
acggacaaatcgcttggcatctgggacactaacgtaggcgtgcgtatcaagcgacttcgg
ggtcacaactcctacgtcaactgctgccatccagcacgacgtgggccacaactcgtgtgc
agtggtagtgacgacagcacgattaagctctgggactctcgtaaacggacgccagttcac
agcttccaagaaaactaccagatcacggcggtcacctttaacgacactgcggagcagatc
atgtccggaggcatcgacaaccagataaaggtatgggacatgcgcaaaaatgcagtgctc
tacaaaatggccggccataccgacactgttactgggctgtgcctcagtccggatggctcc
tacgtgctttcaaactccatggacaacacactaagaatatgggatgtacgtccgtttgca
cctcaggagcgatgtgtcaagatcttgcaggggcatcagcacaattttgaaaagaatctc
ctgaggtgttcatggagccctgatggaagccaggtggccgctggatcggctgaccgcttt
gttcacgtttgggacacaacgtcccgacgggttatctacaaattacccgggcacaatggc
tcggtaaatgatgtccagtttcacccaaaagaacccattatactctcagtgtctagcgac
aagcaagtgtacctcggagaaatcgagaagtga

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