Ornithodoros turicata (relapsing fever tick): 135386394
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Entry
135386394 CDS
T11155
Name
(RefSeq) collagen alpha-1(I) chain-like isoform X1
Organism
oti Ornithodoros turicata (relapsing fever tick)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
FnI_RECK
CFC
Motif
Other DBs
NCBI-GeneID:
135386394
NCBI-ProteinID:
XP_064472378
LinkDB
All DBs
Position
2:150013298..150141253
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AA seq
1476 aa
AA seq
DB search
MTLLLFFACICCSSLLAVDAAARPQVDYDYVTGDGETSCTFEGKKYEDGDEWNPDSCTTC
RCLSGSAVCDTEECQEIECKTQKYIPLGKCCPVCPDEEPEVTEATEPGPRPVTPAYPPQP
LPGPQGSPGEHGVPGRPGDRGEPGIPGAHGIPGSPGPPGPPGDVSQWFHQFSAQQSGDKG
PPPDAFQFMQASVGPVGPRGSPGPSGPPGPQGFQGIRGEPGEPGPPGSPGPVGERGLPGV
PGKDGDPGEDGRPGVQGPPGPQGVRGLPGMPGLPGAKGHRGYPGLDGAKGEQGLVGEKGS
PGLPGKIGPPGPVGPMGTRGERGREGPPGPPGIRGIDGLPGPPGPSGPIGRPGPPGFPGS
PGQKGDAGGTGPKGSQGLQGPRGEAGKPGVPGENGLMGPPGKDGMPGEKGATGDAGAPGS
PGFPGARGPPGLSGSPGQRGMKGAAGVPGSPGYKGEHGMKGETGPPGPRGIPGPAGSPGK
RGKTGTAGPPGPQGAPGERGSPGLRGLPGPDGLAGPKGTQGDRGLQGPQGPKGSGGEAGK
PGLPGLQGIRGIPGLPGIPGKDGLPGERGLPGADGKPGEQGLQGIQGLPGLAGLPGVKGD
QGDAGQDGRLGPPGPPGPRGDTGKEGSAGSPGPPGPPGDHGERGPPGPAGSRGFQGLPGI
PGNPGPHGKDGQQGPPGPAGPVGPAGERGERGYPGERGHSGLPGPPGARGDSGPPGSDGA
RGAPGEKGSKGHAGPPGLIGLPGRRGDAGAPGPKGSRGDHGPPGPEGPMGRPGEQGPQGN
VGPQGPPGEHGEKGEHGAPGPVGPPGAPGAQGDRGLMGSQGPPGFPGPVGAPGSAGPKGS
QGAPGLKGEQGNVGPQGAPGETGPQGIQGLPGPKGPRGETGMKGDTGFVGAPGRPGEPGR
PGEPGNPGQQGPPGPVGIKGSPGDTGKVGAPGPIGNQGLPGLPGPKGESGSEGPSGLPGP
SGPPGPPGERGIPGLPGLQGPPGPAGQRGPQGERGQEGKRGNDGQPGSQGPVGAPGAPGV
PGDQGPPGHPGKHGPPGIMGRPGDKGPVGVPGQPGPPGIQGLQGLPGSPGPSGPTGERGE
RGETGPRGVQGSQGLRGPPGAPGAQGTKGDRGIQGEQGPKGHRGLAGLQGLPGPMGPPGS
KGPPGDLGPTGSPGAPGPKGPAGRDGSSGPQGIMGPPGQRGPPGESGKQGVPGNPGPPGP
PGRPGEPFGYDAAALHAIMGQGQVKGPDPLVGDEPAKLFDSNVPVEEKKRIVFEYYKKLV
EEYEKMRNPTGERDAPAKTCRDLAISHPQLPDGTYWIDPNEGDPKDAVQVYCDMTKRATC
IHPSPNKVPGKAHYIGRGKHTWFSEMNGGFQFTYKIDRVQLTFLQMLSTEAVQNITYLCR
NSVAFFDAAKKLHKRALKMMSYNDLELTASQDETNPAFTYSAIHDDCQTRQNIWRSSVLQ
YKSQKPQRLPIVDVAPRDIGSKNQEFGLEIGRACFS
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgttgctgttcttcgcttgcatctgctgttcctcgcttctcgctgtggatgct
gcggctcggccacaagttgactacgactacgttaccggtgacggagagacgagctgcacg
tttgaagggaagaaatacgaagatggtgacgagtggaatccggacagctgcaccacctgt
cgatgtctctccggtagtgctgtctgtgacacagaagagtgccaggagattgaatgcaag
acacagaaatatattcccctcggaaaatgctgtcccgtctgcccagacgaggaacccgag
gtcaccgaagctacagaacctgggcctcgaccagtgactccagcttatcctccacaacca
cttcctggaccacagggttcaccgggtgaacatggagtcccaggacgtcctggtgatagg
ggcgagcctgggataccaggtgcccacgggatccccggaagtcctggaccaccaggtcct
ccaggagacgtctcccagtggtttcatcagttctcagcccagcaaagtggagacaaggga
ccacctcccgatgcattccagttcatgcaagcatctgtgggccctgtaggtccgcgtggc
tctcctggtcctagtggtccaccaggccctcaaggatttcaaggcatcaggggtgaacct
ggtgaacctggaccacctggatctccaggacctgttggggaaagaggtcttcctggagta
ccgggaaaagatggtgatcctggagaagatggaagacctggggtgcaaggccctcctggt
ccacaaggtgtcagaggccttcctggcatgccaggccttccaggtgctaaaggccacagg
ggttacccaggcctggatggtgccaaaggggaacaagggttagtgggagagaagggctct
cctggtttacctgggaaaattggcccaccgggccctgtgggtccaatgggcaccagaggt
gaaaggggcagggagggtcctccaggtcctccgggcatcagaggcattgatggactccct
ggacctcctggtccttctggaccgattggcagaccaggacctcctggatttccaggatcg
cctgggcaaaagggtgatgcaggaggaacaggacccaaaggaagtcaggggcttcagggc
cctagaggggaagctggaaaaccgggtgttcctggtgaaaatggccttatgggaccaccc
ggaaaagatggaatgccaggagagaaaggagccactggggatgctggagccccaggttcc
ccaggttttccaggtgcgaggggtcccccaggactttcaggaagtccaggccagagagga
atgaaaggagctgcaggtgtacctggcagcccaggctacaaaggagagcatggcatgaaa
ggagagacagggccacctggtccaagagggattcctggccctgctggatcacctggaaaa
cggggaaaaactggtacagcaggccctccaggaccacaaggcgcaccgggtgaaaggggt
tctccagggctgagaggtttaccaggacctgatggtttggcaggtcccaaaggtacccaa
ggcgatcgaggcttacagggaccacagggaccaaaaggatctggaggtgaagcaggcaaa
ccaggtctgccaggtctacagggcataaggggaattcctggtctacctggtattcctggt
aaagatgggcttcctggggagcggggattacctggagctgatggtaagccaggagaacag
gggctgcaggggattcaaggtctgccagggttggctggcctgccaggagtcaagggagat
caaggagatgctggacaagatggccgactgggtccccctggtccccctggaccaagaggt
gacacaggaaaagaaggatctgcaggatctccgggtccccctggacctccaggagatcat
ggcgagagagggcctcctggaccagctggatcgcgaggcttccagggactgccaggcatt
ccaggtaatccgggacctcatggaaaggacggtcaacagggccctccaggtcctgctggc
ccagtgggtcctgcaggagaaaggggagaacgaggatatccaggcgaaagaggccacagt
gggttaccagggccaccaggggccaggggagactctgggcctccaggttcagatggtgct
cggggtgctccaggagaaaaaggatcaaagggtcatgcaggaccacctggattgattggt
cttccaggtcgaaggggagatgctggagcaccaggccccaaaggcagcagaggtgaccac
ggacctccaggacctgagggtcccatgggtcgtcctggtgagcaaggacctcagggaaat
gtgggtcctcagggtccccctggtgaacatggcgagaagggtgaacacggagctcctgga
cctgtgggacctcccggagcccctggtgcccagggcgaccgaggtttaatgggatctcaa
ggacctccaggtttcccaggccctgtgggggctccagggtccgctggaccaaaaggatct
caaggtgctcctggattaaagggcgagcaaggaaatgttggaccccagggtgcccctgga
gaaactggtcctcagggtatacaaggtcttccaggcccaaaaggtccacgtggagaaacg
gggatgaagggagacactgggtttgttggagctccaggaaggccaggagagcctggcagg
ccaggtgagcctggaaatccagggcaacaaggccctccaggacctgtgggcatcaagggc
tctccaggagacactggtaaagtaggagcaccaggaccgataggaaaccagggacttcct
ggccttcccggtcccaagggagagtctggttcggagggccccagtggattaccgggacct
tctggtcctcctggcccccctggagaacgaggcattcctggattacctggtcttcagggg
cctcctggacctgctggacaaagaggacctcagggagagagaggccaggaaggcaagcga
ggaaacgatggccagcctggttctcagggccctgttggagcaccgggtgcgcccggtgtc
ccaggtgaccagggacccccgggtcatccgggtaaacacggacctccgggaattatggga
cgacctggtgacaaaggccctgttggagttcctggacagccaggcccaccgggaatacaa
ggcctacagggtttacctgggtcacctggtccatcaggtcctactggggaacgaggtgaa
agaggcgaaacaggtcctagaggtgtacagggttcccagggcctgagaggccctcctgga
gcaccaggagctcaaggaacaaagggtgacaggggcatccagggcgaacaaggtccaaaa
ggacaccgtggtcttgccgggctacagggattacctggtccgatgggtcctcctggaagc
aagggacctcctggtgatctcgggccaacaggcagcccaggtgcacctggccccaaaggt
cctgcaggtcgtgacggatcttctggacctcagggtataatgggcccccctgggcaacga
gggcccccaggagagtcaggaaaacagggagtacctggtaacccaggtcccccaggacct
cccggcagaccgggtgaaccttttggctatgacgcagctgcattacatgccataatgggt
cagggtcaggtgaagggccccgaccccctggtaggggatgaacctgcaaagttgtttgac
agtaatgtccctgtggaagagaagaaacgaattgtctttgagtattacaagaaattggtt
gaagagtatgagaagatgagaaatcctacaggagaacgtgatgcacctgcaaagacatgc
agagatctcgccatctcccatccacagctacctgatggcacatactggatagatcctaac
gagggtgaccctaaggacgcagtacaagtgtactgtgacatgaccaagagagcgacttgc
attcacccatcacctaacaaggtacctggtaaagcacactacatcggtcgaggaaagcac
acctggttcagtgagatgaatggcggcttccagttcacctacaaaatagatcgtgtccag
ctgacctttctgcaaatgctgagcacagaagctgttcaaaatatcacctacctttgtcgc
aactctgtggccttcttcgatgctgccaagaagcttcacaagagggctctcaaaatgatg
tcctataatgacctggagttgactgcctcccaggatgagaccaacccggccttcacctat
agtgcgatccatgatgattgtcaaactcgacagaacatctggagatcgagtgtcctgcag
tacaaatcccagaagccacagaggttgcccatcgtggatgttgcaccaagagacattggc
tccaaaaaccaagaatttggattagaaattggaagagcatgcttctcttga
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