KEGG   Ornithodoros turicata (relapsing fever tick): 135390724
Entry
135390724         CDS       T11155                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
oti  Ornithodoros turicata (relapsing fever tick)
Pathway
oti03018  RNA degradation
oti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135390724
  09123 Folding, sorting and degradation
   03018 RNA degradation
    135390724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oti03019]
    135390724
   03041 Spliceosome [BR:oti03041]
    135390724
Messenger RNA biogenesis [BR:oti03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     135390724
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     135390724
Spliceosome [BR:oti03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    135390724
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 135390724
NCBI-ProteinID: XP_064476639
LinkDB
Position
4:3414859..3416476
AA seq 138 aa
MLPLSLLRTAQNHPMLVELKNGETYNGHLVNCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVQMKSRGRGDGGKRGGGPGGRGGRGAPRGGTFGGRGGG
RGGPGRGGQGRGGRGRPN
NT seq 417 nt   +upstreamnt  +downstreamnt
atgctacctttatcgctgctgaggacagcgcagaatcaccccatgctggtagagcttaaa
aatggggaaacctacaacggacacctggtcaactgcgataactggatgaatataaatctc
agagaggttatctgcacatctagggatggtgacaaattctggcgcatgccggagtgctac
atccgtggcagcaccatcaaatacctgcgcatccccgacgaagtcatcgacatggtcaag
gaagaggtgcagatgaaaagcagaggccgcggagacggtgggaaacgtggtggtggtcct
ggcggtcgtggaggacggggagctccaagaggcgggacctttggtggccgtggtggcgga
agaggcggaccgggccgcggaggtcaaggacgaggtggaagaggaaggcctaattaa

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