Ornithodoros turicata (relapsing fever tick): 135396945
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Entry
135396945 CDS
T11155
Name
(RefSeq) THO complex subunit 3-like
KO
K12880
THO complex subunit 3
Organism
oti Ornithodoros turicata (relapsing fever tick)
Pathway
oti03013
Nucleocytoplasmic transport
oti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135396945
09122 Translation
03013 Nucleocytoplasmic transport
135396945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oti03019
]
135396945
03041 Spliceosome [BR:
oti03041
]
135396945
Messenger RNA biogenesis [BR:
oti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135396945
Spliceosome [BR:
oti03041
]
Complex C
Other components
EJC/TREX
135396945
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135396945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
eIF2A
Beta-prop_Aladin
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
DSE1_N
Beta-prop_TEP1_C
Tricorn_2nd
RMC1_N
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
PAC11
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
PD40
WD_LRWD1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
135396945
NCBI-ProteinID:
XP_064484263
LinkDB
All DBs
Position
6:complement(62932583..62934728)
Genome browser
AA seq
324 aa
AA seq
DB search
MAPNSSHSSYADTLKSFFQNNSRVKDYQAHLSKVHSVDWSCDGRRLASGSFDKTVSIFVL
ERDRMNKDHVFKGHGDSVDQLCWHPSNPDHLATASLDKTVRLWDARTPKSIAVVGTKGEN
INICWSPDGQTIAVGNKEDLVSFIDVRSHKVRVDQQFKFEVNEISWNNANSHFFLTSGQG
CIHILSCPDLQLQIVLNAHPANCICIEFDPTGRYFATGSVDALVSLWDVEELACVRTFSR
LEWPVRTISFSHDGKMLASASEDLLIDIADVETGDKIFEVPCESPTFTIAWHPKRHLLAF
ACDDKVERDQDAGTVKLFGLPSSS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaatagcagtcattcgagctatgctgacactttaaaatcgtttttccagaat
aacagtagagttaaagactaccaagcgcacttgtcaaaggttcattctgtagactggagc
tgcgatggacgacgtctggcttcggggagcttcgacaagaccgtcagcatttttgtcctg
gaaagggatcgcatgaataaggaccacgtttttaaaggccacggcgacagtgtcgatcaa
ctttgctggcatccttcaaatcctgaccacttagctacagcgagcttggataaaacagtt
cgactttgggatgcacggacgccgaaatctatagccgttgttggaaccaaaggtgaaaac
ataaacatatgctggtctcccgacggccaaacgatcgccgtcggaaacaaggaagacttg
gtttcatttatagatgtgaggtcgcacaaggtgcgtgtggaccagcagttcaagttcgaa
gtcaatgaaatctcttggaacaacgcaaactctcattttttcctcacaagtggtcaggga
tgtatacacatattgagctgtccagatctacagctccagatcgtgctcaatgcacaccca
gctaactgcatctgcattgagtttgaccccacaggacggtactttgcaacagggagcgta
gatgcgctggtcagcctctgggacgttgaagaactggcctgtgtcaggaccttttcaagg
ttggagtggcctgtgaggaccataagctttagccacgacggaaaaatgctggcgtctgct
tcggaagaccttttaattgacattgcggatgttgagacaggtgataaaattttcgaggtg
ccatgtgaatccccaacattcactatcgcttggcatccaaagagacacctgctagccttc
gcctgcgacgacaaagtcgaacgtgaccaagatgcagggaccgttaaattatttggcttg
cccagttcatcgtaa
DBGET
integrated database retrieval system
