Ornithodoros turicata (relapsing fever tick): 135398484
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Entry
135398484 CDS
T11155
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
oti Ornithodoros turicata (relapsing fever tick)
Pathway
oti03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oti00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135398484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oti03021
]
135398484
03019 Messenger RNA biogenesis [BR:
oti03019
]
135398484
Transcription machinery [BR:
oti03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135398484
Messenger RNA biogenesis [BR:
oti03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135398484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
135398484
NCBI-ProteinID:
XP_064485957
UniProt:
A0A2R5LLN1
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All DBs
Position
1:complement(41172348..41173613)
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AA seq
285 aa
AA seq
DB search
MEEIVAKVGNVVFELEIALEQQLGALPLPFPGMDKSGAAVCCFYVQGNCSKASACPFRHV
KGDRTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACSNKECPFLHIDPEAK
IKDCPWYDRGFCRHGPNCRHRHTRRVMCINYLCGFCPEGPECKFMHPKFDLPVQDPAQQA
KKANIVCHYCGEAGHKAISCHKMPPELKEEQQHTRMQFQNHFGGLHRRDQHDDGGNTGST
GGQRGFRPLDQVTCYKCGEKGHYANKCPKGHLAFLSSALQNTGAL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaattgttgcgaaagtaggaaatgtagtgtttgaactggaaattgcattggaa
cagcagctgggtgcattgccgcttccgttccctggtatggacaaatctggagctgcggtc
tgctgcttttacgtgcaaggaaactgcagcaaagcgtctgcatgcccttttcgtcatgtc
aaaggggatcgaacagttgtatgtaaacattggctccgtggtctctgtaagaagggggac
cagtgtgagtttctacacgaatacgatatgacaaagatgcccgaatgctacttctattca
cgctttaatgcttgcagtaacaaggaatgtccatttcttcacatcgacccagaagccaaa
atcaaggattgcccttggtacgacagaggtttctgccgacatgggccgaactgccgtcat
cgtcatacaagacgcgtcatgtgcattaactatctgtgtggtttctgtcccgaaggtcca
gagtgtaaatttatgcaccccaagtttgatcttccagttcaagatcctgctcagcaagct
aaaaaggctaacatcgtctgccactactgtggtgaagcaggacacaaggccatctcttgc
cacaagatgccacctgaactgaaggaagaacaacagcacacacgtatgcagttccaaaat
cactttggagggctccacagacgggaccagcatgatgatgggggaaacacaggcagcact
ggtggccaaagaggcttcaggcccctggatcaagtgacatgctacaaatgtggtgaaaag
ggccattatgccaataaatgtcccaaagggcatttggcatttctcagcagtgcactacag
aatacaggcgcattataa
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