Ornithodoros turicata (relapsing fever tick): 135398761
Help
Entry
135398761 CDS
T11155
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
oti Ornithodoros turicata (relapsing fever tick)
Pathway
oti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135398761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oti03021
]
135398761
03036 Chromosome and associated proteins [BR:
oti03036
]
135398761
Transcription machinery [BR:
oti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135398761
Coactivators
SAGA/TFTC/STAGA complex
135398761
Chromosome and associated proteins [BR:
oti03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
135398761
STAGA complex
135398761
TFTC complex
135398761
SAGA complex
135398761
SLIK complex
135398761
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
NBCH_WD40
CFAP251_N
Beta-prop_DCAF4
DSE1_N
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ASA1
PAC11
Beta-prop_WDR75_2nd
Beta-prop_IFT140_1st
TRM82_WD
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_HPS5
WD_LRWD1
Tricorn_2nd
Beta-prop_Nup120_160
eIF2A
WD40_like
LisH
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
135398761
NCBI-ProteinID:
XP_064486264
LinkDB
All DBs
Position
6:804682..806879
Genome browser
AA seq
684 aa
AA seq
DB search
MADVEASSATLLSTVNNSTTPVSATEPKKESTEKDEDSELNLDKNSLLAVLKFLKKNNLQ
ETELILRKETKIHQLEEEANTDVSSVLSTYKSEGDPDIYEDTYTNFKRFIESSLDSYRHE
LSMILYPAFVHMYLELVYNEHEEQAAKFMERYGREQEEYYQDDVKRLACLTKRDHMKGNE
FMDNFRSGQFTVRMSRDTYNFLKRYLQDKKNAVIQNIIQEHLYLDVYEGIARMKQQLDAT
AGAFLGEAARQANKVKVYYGLLKEPELHIPLDEEDDAVNGEDKPKKKKAKKDPMLSKKSR
NDPNAPPNTRIPLPELRDADKLDKINAMKEAMKRVKLGPESLPSICFYTFLNSYHGVTAA
DISEDSSLLAAGFGDSRIRVWSLTPNKLKGMKSAQDLDTIDKEADDVLYRMMDERSGMES
RLLMGHNGAVTALSFSPDHSYLISSSEDATIRLWSLLTWTNVVCYRGHCFPIWDVKFSPH
GYYFVSCGHDRTARLWSTDSYQPLRVFAGHVSDIDCIQFHHNSNYVATGSSDRTIRLWDV
LTGSCVRYMTGHKNRVYCLQFSNDGRFLASGGSDCKILIWDIAHGHLLAELSSHTSTIYS
LCFSRDATILASGGVDNCVKLWDFTRLLDEMDLEDLNISHAPSVKTNCESCLLGSYPTKS
TSVLALHFTRRNLLLAAGMYHGSL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgaagcaagcagcgcaacgcttctctctactgtaaataatagtactaca
cccgtttctgcgaccgaacctaaaaaagaaagcaccgagaaagatgaagactctgagctt
aacctcgacaagaattcattgctcgctgttctcaagttcctgaaaaagaacaatcttcag
gagaccgaactgatcttgaggaaagagacgaagatccatcaacttgaagaagaggccaac
acagatgtgagcagcgtcttgtcaacgtacaaaagtgagggagatcccgatatctacgag
gacacatacaccaacttcaaacggttcattgagtcttcgctggactcgtaccggcacgaa
ctttccatgattctctatccagccttcgtccacatgtatctcgaacttgtttacaacgag
cacgaagagcaggcagccaaattcatggaacgctacgggcgtgaacaggaagaatactac
caggacgatgttaaacgtctggcctgtcttacgaaacgtgaccacatgaagggaaacgaa
ttcatggataactttcgttccggacagttcacggtgcgtatgtccagggacacttacaat
tttctcaagcgttacttacaagacaagaagaatgcggtcatccaaaacatcatccaagag
cacctctatctggatgtttacgaaggcatcgctcgcatgaaacaacaacttgacgcaaca
gccggggctttcctgggagaagccgccagacaggcaaacaaggtgaaagtttattacggt
ctcctcaaggaaccggagcttcatattcccttggacgaagaagacgacgccgtaaatggt
gaagacaagcccaagaagaaaaaggccaagaaggaccccatgctatccaagaaatctcgg
aacgacccaaatgccccgccaaacaccagaatccctttgcctgaactgagagatgctgat
aagctagataagataaacgccatgaaagaagccatgaaacgagtgaaacttgggccagag
agcttgccttccatttgtttttacacctttttaaacagttatcacggtgtgacagccgcc
gacatatcggaagacagcagtcttctagcagcgggcttcggagattcgcgaatccgggtg
tggagtctcactccgaacaagttaaaaggcatgaaatctgcgcaggatttggacaccatc
gacaaggaagcagacgatgtgctttatcgcatgatggacgagaggagtggcatggagtct
cgtcttctgatgggtcacaatggagcagtgacggcgctcagtttcagtccagatcacagc
tatctcatctcctcctctgaggatgccacaataagactctggagtctgcttacgtggacc
aatgttgtatgctacagaggtcattgtttcccaatctgggacgttaaattttcaccccac
ggctactacttcgtctcgtgtggacacgaccggacggccaggctctggtcaacagattcg
taccaaccgctccgggtctttgctggtcacgtgtccgacatcgactgcatccagttccac
cacaactccaactatgtggcgactggttcgagcgacaggacgattcgtctctgggacgtt
ctgaccgggagttgcgtacgatacatgacggggcacaaaaacagggtttattgtctccag
ttcagcaatgacggtcgcttcttggcgtccggtggttccgattgcaagattttgatctgg
gacatagcgcacggacacttgttggctgaactttcgagccacacgagtacaatatacagt
ctctgcttcagtcgggacgcaacaattctcgcgtccggaggagttgacaactgcgtcaag
ctgtgggacttcacgagactccttgacgagatggatttggaagacctgaacatttcgcac
gcaccctccgtgaaaacaaactgcgaatcgtgtcttctggggtcctacccgacaaaatcg
acttcggtgttggccttacattttacgaggcggaacctattgctagcagcgggaatgtat
cacgggagtttgtga
DBGET
integrated database retrieval system
