Ottowia oryzae: C6570_00870
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Entry
C6570_00870 CDS
T05363
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
otk
Ottowia oryzae
Pathway
otk00521
Streptomycin biosynthesis
otk00523
Polyketide sugar unit biosynthesis
otk00525
Acarbose and validamycin biosynthesis
otk00541
Biosynthesis of various nucleotide sugars
otk01055
Biosynthesis of vancomycin group antibiotics
otk01100
Metabolic pathways
otk01110
Biosynthesis of secondary metabolites
otk01250
Biosynthesis of nucleotide sugars
Module
otk_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C6570_00870 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C6570_00870 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C6570_00870 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C6570_00870 (rfbB)
00525 Acarbose and validamycin biosynthesis
C6570_00870 (rfbB)
Enzymes [BR:
otk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C6570_00870 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AVO32969
UniProt:
A0A2S0MAR2
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All DBs
Position
complement(204937..206031)
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AA seq
364 aa
AA seq
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MILVTGGAGFIGSNFVLDWLAQGDEPVVNLDKLTYAGNLANLASVQGDTRHTFVQGDIGD
TALVERLLAEHRPRAIVNFAAESHVDRSIQGAEDFIVTNIVGTFRLLEAARAYWAGLPEA
ERGAFRFLHVSTDEVYGSLAPDAPAFTESHVYEPNSPYSASKAASDHLVRAWHHTHGLPV
LTTNCSNNYGPFHFPEKLIPLMIVNALAGKPLPVYGDGQQVRDWLYVKDHCSAIRRVLEA
GTLGETYNVGGWNEKANLNIVHTVCDLLDEMAPRAQGGSYREQITHVKDRPGHDRRYAID
ARKIERDLGWKPAETFDTGIRKTIAWYLANEAWVRDVQSGGYRDWVAAQYGAQGGNATTA
QPAA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcgtaaccggcggcgccggcttcatcggcagcaacttcgtgctggactggctg
gcgcagggcgacgagcccgtcgtcaacctggacaaactgacctacgcgggcaacctggcg
aacctggcgtccgttcagggcgacacacgccacaccttcgtgcagggcgacattggcgac
accgcgctggtcgagcgcctgttggccgagcaccgcccgcgcgccatcgtcaactttgcg
gccgaaagccacgtggaccggtccatccaaggcgccgaggatttcatcgtcaccaacatc
gtgggcaccttccgcctgctggaggccgcgcgggcgtactgggcgggcctgcccgaggcg
gagcgcggcgcgttccgcttcctgcacgtttccaccgacgaggtgtacggcagcctggcg
cccgacgcgccagcgttcaccgaatcgcacgtgtacgagcccaacagcccctacagcgcc
agcaaggccgccagcgaccacctggtgcgcgcgtggcaccacacgcacggcctgcccgtg
ctgacgaccaattgctccaacaactacgggccgtttcacttccctgagaagctcatcccg
ctgatgatcgtcaacgccctggcgggcaagccgctgccggtgtacggcgacggccagcag
gtgcgcgactggctgtacgtgaaagaccactgctcggccattcgccgcgtgctggaggcc
ggcacgctgggcgaaacgtacaacgtcggcggctggaacgagaaagccaacctgaacatc
gtgcacaccgtgtgcgacctgctggacgagatggccccgcgcgcgcaaggcggcagctac
cgcgagcagatcacccacgtgaaggaccgccccggccacgaccgccgctacgccatcgac
gcccgcaagatcgagcgcgatttgggctggaagccggccgaaaccttcgataccggcatc
cgcaagaccatcgcctggtacctggccaacgaagcctgggtgcgcgatgtgcagtcgggc
ggctaccgcgactgggtggccgcgcaatatggcgcgcagggcggcaacgccaccacggcg
caaccggcggcttga
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