Ottowia oryzae: C6570_04500
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Entry
C6570_04500 CDS
T05363
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
otk
Ottowia oryzae
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otk03032
]
C6570_04500 (gyrB)
03400 DNA repair and recombination proteins [BR:
otk03400
]
C6570_04500 (gyrB)
Enzymes [BR:
otk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C6570_04500 (gyrB)
DNA replication proteins [BR:
otk03032
]
Prokaryotic type
DNA Topoisomerases
C6570_04500 (gyrB)
DNA repair and recombination proteins [BR:
otk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C6570_04500 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AVO33595
UniProt:
A0A2S0MCH5
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All DBs
Position
975020..977602
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AA seq
860 aa
AA seq
DB search
MTEPTQLPDPERQPQAPGGADGYGEGAIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFE
VVDNSIDEALAGYCDDIVVTIHSDNSLSVVDNGRGIPTGVKMDDKHEPKRSAAEIALTEL
HAGGKFNQNSYKVSGGLHGVGVSCVNALSSTLRLTVRRDGKKHELEFSRGFVQGRILEVV
DGVEISPMKITGDTDKRGTEVRFLPDTEIFKENNDFHYEILSKRLRELSFLNNGVRIRLA
DERTGKEDDFSGADGVKGFVDFINGGKRVLHPNAFYATGSRPADSYGGIPDTEIGVEVAM
QWNDGYNEQVLCFTNNIPQRDGGTHLTGLRAAMTRVISKYIADNDLAKKAKVDVSGDDMR
EGLTCVLSVKVPEPKFSSQTKDKLVSSEVRAPVEDIVAKALTDYLQERPNDAKIITGKIV
EAARAREAARRAREMTRRKGVLDGFGLPGKLADCQEKDPSMCEIYIVEGDSAGGSAKQGR
DRKFQAILPLRGKILNVERARYEKLLTSNEIVTLITALGTGIGKTAADSGKSAADDFNID
KLRYHRVIIMTDADVDGAHIRTLLLTFFYRQMAELVERGHIYIAQPPLYKVKAGKEELYL
KDDAALEGFLMRIALKDAVVHTGGDHPQALSGDTLAELARKYQLTESVIGRLSAFMDVEA
LRAITGGVALNLDNAANAEVSAVALQQLLAALHTNGSVPEVASEFDARTDKPILRISRAH
HGNIKSSVITQDFVLGVDYAALAEAAQTFKGLLGAGARVTRGEGERQREQDVSSFREAMQ
WLLGEAERTTSRQRYKGLGEMNPEQLWETTMDPEVRRLLRVQIDDAIEADRVFTTLMGDE
VEPRRDFIETNALRASNIDA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacctacccagcttccagaccccgagcgccaaccgcaggcgccaggcggtgcc
gacgggtacggtgagggcgccatccagatcctggagggcctggaggccgtgcgcaagcgc
cctggtatgtacatcggcgacaccagtgacggcaccggcctgcaccacctggtgttcgag
gtggtcgacaactcgatcgacgaggcgctggcggggtattgcgacgacatcgtcgtgacc
atccacagcgacaactcgctgagcgtggtcgacaacggccgcggcattcccaccggcgtg
aagatggacgacaagcacgagcccaagcgctcggctgccgagatcgccctgaccgagctg
cacgcgggcggcaagttcaaccagaacagctacaaagtttcaggcggcctgcacggcgtg
ggcgtgagctgcgtgaacgcgctgtccagcacgctgcgcctgacggtgcgccgcgacggc
aagaagcacgagctggaattcagtcgcggcttcgtgcagggccgtattctggaggtggtg
gacggcgtggaaatctcgccgatgaagatcacgggcgacacggataagcgcggcaccgag
gtgcgctttctgcccgacaccgagatcttcaaagagaacaacgatttccactacgaaatc
ctcagcaagcgcctgcgcgagctgagctttctgaacaacggcgtgcgcattcgcctggcg
gacgagcgcaccggcaaggaagacgacttctctggcgccgacggcgtcaagggcttcgtc
gacttcatcaacggcggcaagcgcgtgctgcaccccaacgcgttttacgccaccggctcg
cgcccggcggattcctacggcggcattcccgacaccgagatcggggtcgaggtggccatg
cagtggaacgatggctacaacgagcaggtgctctgcttcaccaacaacatccctcagcgc
gacggcggtacccacctgaccggcctgcgcgcggcgatgacgcgggtgatcagcaagtac
atcgccgacaacgatctggccaagaaagccaaggtcgacgtgtcgggcgacgacatgcgc
gaagggctgacctgcgtgctcagcgtgaaggtgcccgagcccaagttcagcagccagacc
aaggacaagctggtcagcagcgaagtgcgcgcgccggttgaagacatcgtggccaaggcg
ctcaccgactacctgcaagagcgcccgaacgacgccaagatcatcaccggcaagattgtc
gaagctgcccgcgcccgcgaagccgcccgccgtgcccgcgagatgacgcgccgcaaaggc
gtgctggacggcttcggcctgcccggcaagctggccgactgccaggaaaaagacccgtcg
atgtgcgagatctacatcgtcgagggcgattccgccggcggctcggccaagcaggggcgc
gaccgcaagttccaggccatcctgccgctgcgcggcaagatcctgaacgtggagcgcgcg
cgctacgagaagctgctgaccagcaacgaaatcgtcacgctgatcaccgccctcggcacc
ggcatcggcaagaccgcagccgattcaggcaagagcgcggcggacgatttcaacatcgac
aagctgcgctaccaccgcgtcatcatcatgaccgacgcggacgtcgacggcgcgcacatc
cgcaccctgctgctcaccttcttctaccgccagatggccgagctggtcgagcgcgggcac
atctacatcgcccagccgccgctgtacaaggtcaaggccggcaaggaagagctgtacctg
aaagacgatgccgcgctggaaggcttcctgatgcgcattgcgctgaaagacgccgtggtg
cacacgggcggtgaccacccgcaggcgctttccggcgacaccctggccgagctggcccgc
aagtaccagctgaccgaatccgtcatcggccgcttgtctgcttttatggacgtggaagcc
ctgcgtgccatcaccggcggcgtggcgctcaatctggacaacgccgcgaacgccgaagtc
agcgccgttgcgctgcagcagctgctggcagcgctgcacaccaacggcagcgtgccggaa
gtggccagcgaattcgacgcccgcaccgacaagcctatcctgcgcatcagccgcgcgcac
cacggcaacatcaagagcagcgtgatcacgcaagacttcgtgctgggcgttgactacgcc
gccttggccgaggccgcgcagaccttcaaaggcctgctgggcgccggcgcccgcgtgacc
cgtggcgaaggcgagcgccagcgcgagcaggacgtgagcagcttccgcgaagcgatgcag
tggctgctgggcgaggccgagcgcaccaccagccgccagcgctacaaaggcctgggcgag
atgaaccccgagcagctgtgggaaaccaccatggatcccgaagtgcgccgcctgctgcgc
gtgcagatcgacgatgccatcgaagccgaccgcgtgttcaccacgctgatgggtgacgag
gtggagccccgccgcgatttcatcgagacgaacgcgctgcgcgcctcgaacatcgacgcc
tga
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