Ottowia oryzae: C6570_04960
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Entry
C6570_04960 CDS
T05363
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
otk
Ottowia oryzae
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otk03032
]
C6570_04960
03036 Chromosome and associated proteins [BR:
otk03036
]
C6570_04960
03400 DNA repair and recombination proteins [BR:
otk03400
]
C6570_04960
DNA replication proteins [BR:
otk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C6570_04960
Chromosome and associated proteins [BR:
otk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
C6570_04960
DNA repair and recombination proteins [BR:
otk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
C6570_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AVO33678
UniProt:
A0A2S0MCT9
LinkDB
All DBs
Position
1061677..1061949
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIEHIAMNADLSKADAGRALEATLGAIKTTLRKGGAVSLVGFGTFAVGKRAARTG
RNPRTGAAVKIKASKVPKFKAGKALKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagactgaactgatcgaacacatcgccatgaacgccgacctctccaaggccgac
gccggccgcgcgctggaagcgaccctgggcgccatcaagaccaccctgcgcaaaggcggc
gccgtctctctggtgggcttcggcaccttcgccgttggcaagcgcgccgcgcgcaccggg
cgcaatccgcgcaccggcgccgccgtgaagatcaaggcgagcaaggtgcccaagttcaag
gccggcaaggcgctcaaagacgcgctgaactga
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