Ottowia oryzae: C6570_06275
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Entry
C6570_06275 CDS
T05363
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
otk
Ottowia oryzae
Pathway
otk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C6570_06275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otk02000
]
C6570_06275
Transporters [BR:
otk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C6570_06275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
HTH_33
Motif
Other DBs
NCBI-ProteinID:
AVO33900
UniProt:
A0A2S0MDJ7
LinkDB
All DBs
Position
complement(1327957..1329624)
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AA seq
555 aa
AA seq
DB search
MPTIARPTSSRRILRASALTAALLVIGIGAAHAQGKTLRIAMTAADIPRTLGQPDQGFEG
NRFTGIPIYDSLTQWDLSKADAPSVLIPGLATSWAVDAKDKTKWVFKLRPGVTFHDGSPF
NADAVVWNVNKVLDKEAPQFDASQVGVTASRMPTLRSARKIDDLTVELTTSEPDSFLPIN
LTNLFMASPAAWKKAFDAAKGATPADKSKAAWTAFAAAPSGSGPFKVTRFAARERLELAA
NKSYWDAKRVPKIDKVVLLPMPEANARTAALLGGQVDWIEAPAPDALDQIKQRGFKVYAN
AQPHVWPWQFSFAPGSPWLDKRVRQAANLCVDRGGLKQLLGGMMAEAKGVVAPGHPWWGN
PKFDIKYDVKGAQALMQQAGWSAAKPLKVKVQISASGSGQMQPLPMNEFIQQSLKACYID
VDFDVIEWNTLFTNWRKGAKDATANGANAVNISFAAMDPFFAMVRFVSSKAFPPASNNWG
YYGNPEVDKLVADARTSFDDKARDAALAKLHAHMVEDPPFLYVAHDVGPRAMSPKVKHVV
QPRSWFIDLATMTMD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgattgcccggccgacctcctcccgccgcatcctgcgcgccagcgccctgacc
gccgccctgcttgtgatcggcatcggcgccgcccatgcgcaaggcaaaaccctgcgcatc
gccatgacggccgccgacatcccgcgcacgctgggccagcccgatcagggctttgagggc
aaccgcttcaccggcatcccaatctacgactcgctcacgcagtgggatttgtcgaaggcc
gacgcgcccagcgtgctgattcccggcctggccaccagctgggcggtggacgccaaggac
aagaccaaatgggtgttcaagctgcgcccgggggtcactttccacgatgggtcgcccttc
aacgccgacgcggtggtgtggaacgtgaacaaagtgctggacaaggaagcgccgcagttc
gacgccagccaggtgggcgtgacggcatcgcgcatgcccacgctgcgcagcgcccgcaag
atcgacgacctgacggtggagctgaccaccagcgaacccgattcctttctgcccatcaac
ctgacgaacctcttcatggcgtcgccagcggcgtggaaaaaggcgttcgacgccgccaag
ggcgccacacccgccgacaagtccaaggccgcatggacggcgttcgccgcggcgccctcg
ggctcgggcccgttcaaggtcacgcgcttcgcggcgcgcgagcggctggaactggccgcc
aacaagagctattgggacgccaagcgcgtgcccaagatcgacaaggtggtgctgctgccc
atgcccgaagccaacgcccgcaccgccgccttgctgggcggccaggtggactggatcgag
gcgcccgcgcccgacgcgctggaccagatcaagcagcgcggcttcaaggtatacgccaac
gcacagccgcatgtgtggccgtggcagttctcctttgcgccgggatcgccctggctcgac
aagcgcgtgcgccaggcggccaacctgtgcgtggaccgcgggggcctcaagcaactgctg
ggcggcatgatggccgaggccaagggcgtggtcgccccgggccacccgtggtggggcaac
cccaagttcgacatcaagtacgacgtcaagggtgcgcaggcgctgatgcagcaggccggc
tggtcggccgccaagccgctgaaggtgaaggtgcagatctcggcctcgggctctggccag
atgcagccgctgccgatgaacgagttcatccagcagtcgctgaaggcctgctacatcgac
gttgacttcgacgtgatcgagtggaacacgctgttcaccaactggcgcaaaggtgccaag
gatgcgacggccaacggcgcgaacgcggtcaacatcagcttcgcggcgatggatccgttc
ttcgcgatggttcgcttcgtgtcaagcaaggccttcccgcccgcgtccaacaactggggc
tactacggcaaccccgaggtggacaagctggtggcagacgcgcgcacctcgttcgacgac
aaggcccgtgatgcggcgctggccaagctgcacgcgcacatggtggaagacccgcccttc
ctgtacgtggcgcacgacgtgggcccccgcgccatgtcgcccaaggtcaagcacgtggtg
cagccgcgcagctggttcatcgacctggccacgatgacgatggactga
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