Ottowia oryzae: C6570_06490
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Entry
C6570_06490 CDS
T05363
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
otk
Ottowia oryzae
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otk03021
]
C6570_06490 (rpoH)
Transcription machinery [BR:
otk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C6570_06490 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AVO33936
UniProt:
A0A2S0MDN9
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All DBs
Position
complement(1370959..1371894)
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AA seq
311 aa
AA seq
DB search
MDTASSSGAVALANPWAVVPPLGNLDAYITAVNRLPMLTQEEEQRFARELRDDDNLEAAG
KLVLSHLRLVVSTSRQYLGYGLPHADLIQEGNVGLMKAVKRFNPDQGVRLVSYALHWIKA
EIHEYILKNWRLVKVATTKAQRKLFFNLRSMKQGFKAEDAEADITHRDVLTDAQIDVVAT
QLNVKPEEVREMETRLSGGDVLLDPTPADSDGEQAFGPIAYLSDAHHEPTAMIESAQRDA
LATEGIATALKSLDERSRRIVTERWLNVNDDGSGGMTLHELAAEYGVSAERIRQIEVAAM
KKMKAALAEYA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggataccgcctccagctctggcgctgtagcgctggccaatccgtgggccgtcgttccg
ccgctgggcaacctggatgcgtacatcaccgccgtcaatcggctgcccatgcttacccaa
gaggaagagcagcgctttgcccgcgagctgcgcgatgacgacaacctggaagccgccggc
aaactggtgttgtcgcacctgcgcctggtggtttccacctcgcgccagtacctgggctat
ggcctgccgcacgccgacctgattcaggaaggcaacgtcggcctgatgaaggccgtcaag
cgcttcaaccctgaccaaggcgtgcgcctggtcagctacgccctgcactggatcaaggcc
gagattcacgaatacatcctgaagaactggcgcctggtgaaggtggcgaccaccaaggcc
cagcgcaagctgttcttcaacctgcggtccatgaagcaaggtttcaaggccgaggacgcc
gaagccgacatcacccaccgcgatgtgctgacggatgcgcagatcgacgtggtggcgacg
cagttgaacgtcaagcccgaggaagtgcgcgagatggaaacgcgcctgtctggcggcgac
gtgctgctggacccgacgcccgcagacagcgatggcgaacaggcttttggccccatcgct
tacctgtcggacgcgcaccatgagcccacggcgatgatcgaatcggcccagcgcgacgcg
ctggccaccgaaggcattgccacggcgctgaaaagcctggatgagcgcagccgccgcatc
gtgaccgagcgctggctgaatgtgaacgacgacggctcgggcggcatgacgctgcatgaa
ctggcggccgaatacggcgtgagcgccgagcgcatccgccagatcgaggtggcggccatg
aagaagatgaaagctgcgctggcagagtacgcctga
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