Ottowia oryzae: C6570_14235
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Entry
C6570_14235 CDS
T05363
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
otk
Ottowia oryzae
Pathway
otk03410
Base excision repair
otk03430
Mismatch repair
otk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C6570_14235 (recJ)
03430 Mismatch repair
C6570_14235 (recJ)
03440 Homologous recombination
C6570_14235 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otk03400
]
C6570_14235 (recJ)
DNA repair and recombination proteins [BR:
otk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C6570_14235 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C6570_14235 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C6570_14235 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AVO35259
UniProt:
A0A2S0MH96
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All DBs
Position
3124079..3125785
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AA seq
568 aa
AA seq
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MKIEVRSVPPRAAWALEQAGVHPLLARLYAARGVATQDDLDDGLARLLPPSGLLGASDAA
RLLADAVAAGQRICIVADYDCDGATACAVGLRGLQLLGATDVHYLVPDRVVDGYGLTPPI
AERVAATGAQVLVTVDNGIASVAGVARARELGLKVLVTDHHLPGDQLPAADVIVNPNQPG
CGFESKSLAGVGVMFYVLMALRAELRARGAWGNAQQPKLDVLLPLVALGTVADVVKLDAN
NRRLVAQGLRRIRAGQLPAGMIALFSVAARAYPKATTFDFGFALGPRINAAGRLADMTLG
IELLRTDDPARADELARQLDAINRERREIEGGMREQAMHIAEGLWDEAEAAPSALAVFDP
DFHEGVVGIVAARLKDKLHRPTFVFAASAAPGHEHELKGSGRSIPGFHLRDALDLVAKRH
PGVLLKFGGHAMAAGCTIAEDHFETFDAALQQVAAEWLDEATLTRRIETDGPLPPEYRRA
DVVDTLHQAVWGQGFAPPVFSEEVEVLSQRLVGEKHLALKLRHQGQPVDGIWFGHTEPLP
ARAHLAFRLETDEWQGVRRVRLLVEGAA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgaagtaagaagcgtaccgccccgcgccgcgtgggcgctggaacaagcgggc
gtgcacccgctgctggcgcgcctgtacgccgcgcgcggtgtggccacgcaagacgatctg
gacgatggtctggcgcgccttttgccgccgtccggcctgctgggcgccagcgacgccgcc
cgcctgctggccgacgccgtggccgccggccagcgcatctgcatcgtggccgactacgac
tgcgacggcgccaccgcctgcgctgtgggcttgcgcggcctgcagctgctgggcgctacc
gacgtgcactacctggtgcccgaccgcgtggtggacggctacggcctcaccccgcccatc
gccgagcgcgtggccgccaccggcgcgcaagtgctggtgacggtggacaacgggatcgcc
agcgtggccggcgtggcgcgcgcgcgcgagctgggcctgaaggtgctggtgaccgaccac
cacttgcccggcgaccaattgcccgccgccgacgtcatcgtcaaccccaatcaacccggc
tgcggctttgaaagcaaatcgctggccggcgtgggcgtgatgttctacgtgctgatggcg
ctgcgggccgagctgcgcgcgcgcggggcctggggcaacgctcagcagcccaagctggac
gtgctgctgccgctggtcgcgctgggcaccgtggccgacgtggtcaagctggacgccaac
aaccgccgcctggtcgcgcagggcctgcggcgcatccgtgcggggcagctgcccgcaggc
atgattgctctgttttcggtagctgcccgcgcttatcccaaggccaccacgttcgatttt
ggctttgcactgggcccacgcatcaacgccgccgggcgcctggccgacatgacgctgggc
atcgagctgctgcgcaccgacgaccctgcgcgcgccgacgaactggcccgccagttggac
gccatcaaccgcgagcgccgcgaaatcgaaggcggcatgcgcgagcaggccatgcacatc
gccgaaggcctgtgggacgaggccgaagccgcgcccagcgcgctggccgtgtttgacccc
gattttcacgaaggcgtggtcggcatcgtcgccgcgcggctgaaagacaagctgcaccgc
cccaccttcgtctttgccgccagcgccgcgccggggcatgagcacgagctgaaaggctct
ggccgatccatccccggctttcacctgcgcgacgccctggacctggtcgccaagcgccac
cccggcgtgctgctgaaattcggcggccacgccatggccgcgggctgcaccattgccgaa
gatcactttgaaaccttcgacgcggcgctacagcaagtcgccgccgaatggctggacgaa
gcgacgctgacgcgccggatcgaaaccgacggcccgctgccgcccgaataccggcgcgcc
gacgtggtcgacacgctgcaccaggccgtctggggccagggctttgcgccgccggtgttc
agcgaagaggtagaggtgctcagccagcgcctggtgggcgaaaaacacctggcgctgaag
ctgcgccaccaaggccagccggtagacggcatctggtttggccacaccgagccattgccc
gcccgcgcgcacttggcgtttcgcctggaaaccgacgaatggcaaggcgtgcggcgcgtg
cgcctgctggtcgagggcgcggcgtga
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