Ottowia oryzae: C6570_16085
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Entry
C6570_16085 CDS
T05363
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
otk
Ottowia oryzae
Pathway
otk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C6570_16085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otk03400
]
C6570_16085
Enzymes [BR:
otk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
C6570_16085
DNA repair and recombination proteins [BR:
otk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C6570_16085
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C6570_16085
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C6570_16085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AVO35572
UniProt:
A0A2S0MI72
LinkDB
All DBs
Position
complement(3516562..3518010)
Genome browser
AA seq
482 aa
AA seq
DB search
MTVTTFLWHDYETFGANPRRDRPAQFAAIRTDAELNEIGEPVMLYCQPATDALPDPQSCL
ITGITPQECAAKGVSESEFARQIQDLLAEPGTIGVGYNSIRFDDEVTRFMLWRNLRDPYA
REWQNDCGRWDLLDVVRATHALRPEGIEWPVGEDGLPTFRLEKLSAANGLVHESAHDALS
DVRATIALARLIRQRQPKLFDFCLQLRAKDRVAQELGLPSTLREARPFLHVSGMFGATRG
CIAVMWPLAMHPTNKNELLAWDLSADPSELADLTPEQVRERLFTPSADLPEGVTRLAIKG
VHLNKSPIVVSSLKTLRPELAERWGIDLTQAARHAEALRALPDLSALWAAVYERPRAAEA
VDVDEDLYGGFVGNTDRRRLNALLALSPEELARDRTGFDDARLAELVFRYRARNFPDTLT
PPEAERWQAHRIARLLEGEGGALTVQALFDRIDQLAETAEDERTQSILEALYEWGEAMAP
DA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaaccaccttcctctggcacgactacgaaacctttggcgccaacccgcgccgc
gaccgcccagcgcagttcgccgccatccgcaccgacgctgagctgaacgagatcggcgag
ccggtgatgctgtactgccagcccgccaccgacgcgttgcccgacccccaatcgtgcctg
atcaccggcatcacgccgcaggaatgcgccgccaaaggcgtgtcagaaagcgagtttgcg
cggcagatccaagacctgctggccgagccgggcaccattggcgtgggctacaactccatc
cgctttgacgacgaggtgacgcgcttcatgctgtggcgcaacctgcgcgacccgtacgcg
cgcgagtggcaaaacgattgcggccgttgggatttgctggacgtggtgcgcgccacgcat
gcgctgcggcccgagggcatcgagtggcctgtgggtgaagacgggctgcccaccttccgc
ctggaaaagctcagcgccgccaacggcctggtgcacgaatcggcgcacgatgcgctgtcc
gacgtgcgcgccaccatcgcgctggcgcggctgattcgccaacgccagcccaagcttttc
gacttttgcctacagctgcgcgccaaagaccgcgtggcgcaggagctgggtttgcccagc
acgctgcgcgaggcgcgcccattcctgcacgtcagcggcatgttcggcgccacgcgcggc
tgcatcgcggtgatgtggccgctggccatgcaccccaccaacaagaacgagcttctggcc
tgggacttgtcggccgaccccagtgagctggccgacctcacacccgagcaggtgcgcgag
cgccttttcacccccagcgccgacctgcctgaaggcgtgacgcggctggccatcaagggc
gtgcacctgaacaagtcgcccatcgtcgtcagcagcctgaaaaccctgcggcccgagctg
gccgagcgctggggaatcgacctgacccaggcggcccgccatgccgaggccttgcgcgcg
ctgcccgatctgagcgccctgtgggccgccgtgtatgagcgcccgcgcgcggcagaggcg
gtggacgtggacgaagacctgtacggtggctttgtcggcaacaccgaccgccgccgcctg
aacgccctgctggcgctgtcgcccgaagagctggcgcgcgaccgcacgggctttgacgac
gcgcgcctggcggagctggtctttcgctaccgcgcccgcaacttccccgacacgctgacg
ccacccgaggccgagcgctggcaggcacaccgcattgcccggctgctggaaggcgagggc
ggcgcgctcacggtgcaggcgctgttcgaccgcatcgaccagctggccgaaaccgccgag
gacgaacgcacccagagcatcctggaggccttgtacgagtggggcgaggccatggcaccg
gatgcctga
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