Ottowia oryzae: C6570_16360
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Entry
C6570_16360 CDS
T05363
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
otk
Ottowia oryzae
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otk03400
]
C6570_16360
Enzymes [BR:
otk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6570_16360
DNA repair and recombination proteins [BR:
otk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C6570_16360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AVO35617
UniProt:
A0A2S0MIH3
LinkDB
All DBs
Position
complement(3573587..3576934)
Genome browser
AA seq
1115 aa
AA seq
DB search
MSIDNQPAYEHNGQPCAREVFYAIACDPRRSVAVEACAGAGKTWMLVSRILRALLNGAEP
QEILAITFTKKAAGEMRQRLQQWLSDFAKRREGETDEAWQARLDNELRIRGIEPQRWPEL
RQTLQKLYPALLAYGRTVQIRTFHSWFAALLRSAPLKVLQDQGLPSAYELLEDDQDAVAE
VWRRYLGDVARDAALREDYAALVRALGRSRAHEALEAALARRVEFTLADEAGRIDDAVPA
FGAYYPRLAGVAAPADWLMAREPGRALLLAAAEALLPGARTFAECGAKLKAAVAAGDWAS
AQDALVTKGGDPRKFNDKLAGIDDVRAAQEEVLAVRRAERQQAAREHHLRMARLTRPLIR
AFAQLKLDRGWVDMTDIERAAHTLLSDSDYSAAVQERLDARVRHLLIDEFQDTNPLQWQA
LHAWLAGYVGAGGGQTPPSVFIVGDPKQSIYRFRRADPRVFAAAQDFVVHGLGGDRLACD
HTHRNTPAVLGAVNQVMGQAQAAGEFSGYRTHTTQSNVTGEVLALPLIPRPDKAAADDAE
DEDDAPAWRDSLTTPRVTLEEKLNMLEARQAARWIAARVAAGRAPSDIMVLARRRLPLGL
LQAELRQYGIPCEQPEQQVLGDLPVVQDVLALVDALVSPGNDLSLARALKSPLFGLADEA
LVQIALAVRAARTDGGDAPAGAGRAASAWLDLLPKVQLPAHDSAALHADLMLYQGWLRSL
PPHDALQAIYTHRDALARFAAAAPRAERDHAVAQLRALLGAALQVQGGRFLTAYQWVRAL
RRQRLMAPRHAAPDAVQLLTVHGAKGLEAEDVLLVDTASGLRTRSEATALIDWPGDAPAP
TQFVFLANGNAPPPSAEDLARQEVDAQAREELNALYVGMTRARERLVLSGVTPHRQPATS
WWQRIQPLAAPLPAPEAPPAPAGDAASAAAFSMLDLPPAPVQPAQAAIEIEVMRIEADPL
RTPPTDASRLGEAMHWLLENAHDGPEGWRPERLSQARTRYALTPEQASRAEALARRIFTG
EAAWAWSADEVLQAFNEVELTHDGQRLRIDRLVRRRASAGQPEAWWVLDYKSAFHPERDP
LLQAQMARYRAAIERLHPGQPVRVAFLTGDGRVVG
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgacaaccaacccgcctacgaacacaacggccagccctgcgcgcgcgaagtt
ttctacgccatcgcgtgcgacccgcgccgcagcgtggccgtcgaagcctgcgcgggcgcg
ggcaagacctggatgctggtgtcgcgcatcctgcgcgcgctgctgaacggggccgagccg
caagaaatcctggccatcaccttcaccaagaaagccgctggcgaaatgcgccagcgcctg
cagcaatggctgagcgacttcgccaagcgccgtgaaggcgagacggacgaagcctggcaa
gcgcggctcgacaacgaactgcgcatcaggggaatcgagccccagcgctggccagagctg
cgccagacgctacaaaaactgtatcccgcgctgctggcgtacggccgcactgtgcagatc
cgtaccttccacagctggtttgccgcgctgctgcgcagtgccccgctcaaggtgctgcaa
gaccagggtttgccgtcggcctacgagctgctggaagacgaccaggacgcggtggccgaa
gtgtggcgccgctacctgggtgacgtggcgcgcgatgcggctctgcgtgaagactacgcc
gcgctggtccgcgcgctgggccgcagccgcgcccacgaggcgctggaagccgcgctggcc
cgccgcgtggaattcaccttggccgacgaggccggccgcatcgacgacgccgtgcccgcc
tttggcgcctactacccgcgcctggccggcgtggcggccccggccgactggctgatggcg
cgcgagccgggccgcgccctgctgctggccgccgccgaagccctgctgcccggcgcgcgc
acgtttgccgaatgcggcgccaagctgaaggccgccgtggcggcgggcgattgggccagc
gcgcaggacgccctggtcaccaaagggggcgatccgcgcaagttcaacgacaagctggcc
ggcatcgacgacgtgcgcgccgcgcaagaagaagtcctggccgtgcgccgggccgagcgg
cagcaggccgcgcgcgagcaccacctgcgcatggcgcgcctcacgcggccgctgatccgc
gcgtttgcgcagctcaagctggaccgtggctgggtggacatgaccgacatcgagcgcgcc
gcccacaccctgctgtctgacagcgactacagcgccgccgtgcaagagcggctggatgcg
cgcgtgcgccacctgctgatcgacgagtttcaagacaccaacccgctgcaatggcaggcg
ctgcacgcctggctggcgggctacgtgggcgcgggcggtgggcaaacgccgcccagcgtt
ttcatcgtgggcgaccccaagcaaagcatctaccgctttcgccgcgccgacccgcgcgtg
ttcgccgccgcgcaggatttcgtggtgcacggcctgggcggcgaccgcctggcgtgcgac
cacacgcaccgcaatacgcccgccgtgctgggcgccgtcaaccaggtcatgggccaggcg
caggccgcgggcgaattcagcggctaccgcacgcacaccacgcaatccaatgtgaccggc
gaagtgctggcgctaccgctgatcccacgccccgacaaagcggctgcggacgatgcagag
gacgaagacgacgccccggcctggcgcgacagcctcaccaccccgcgcgtcacgctggaa
gaaaagctgaacatgctggaagcgcgccaggccgcgcgctggatcgccgcgcgcgtggcc
gctgggcgcgcgcccagcgacatcatggtgctggcccgccgccgcctgcccctcggcctg
ctgcaggcagagttgcgccagtacggcatcccgtgcgagcagcctgagcagcaggtgctg
ggcgacttgccggtggtgcaagacgtgctggcgctggtcgatgcgctggtctcgcccggc
aacgatctgtcgctggcgcgggcgctcaaatcacccctgttcggcctggccgacgaggcg
ctggtgcagatcgcgctggccgtgagagcggcgcgcactgacggcggcgacgcgcccgcg
ggcgcaggccgtgctgcctcggcgtggcttgatttgctaccaaaagtgcagctgccagcg
cacgacagcgctgcgctgcacgccgatttgatgctttaccagggctggctgcgcagcctg
ccgccgcacgacgcgctgcaagccatctacacccaccgcgacgcgctggcgcgctttgcc
gccgccgcgccgcgcgctgagcgcgaccacgccgtcgcccagctgcgcgcgctgctgggc
gccgccttgcaggtgcagggcgggcgctttttgaccgcctaccagtgggtgcgcgcgctg
cgccgccagcgcctgatggccccgcggcacgccgcgcccgacgccgtgcaactgcttacc
gtgcacggcgccaaggggctggaggccgaagacgtgctgctggtcgacaccgcatccggc
ctgcgcacccgcagcgaagccaccgcactgatcgactggcccggcgacgcgcccgcgccc
acccagttcgtctttctggccaacggcaacgcgccgccgcccagcgcagaagatttggcc
cgccaagaggtggacgcgcaggcgcgcgaagagctcaacgcgctgtacgtcggcatgacc
cgcgcgcgcgagcggctggtgctctcgggcgtcacgccgcaccgccagcccgccaccagt
tggtggcagcgcatccagccactggccgcgcccctgccagcgcccgaagcgccccccgcg
cctgcgggcgacgcggccagcgcagcggcattttctatgctcgatctgccaccagcgccc
gtgcagccagcgcaagcagctatcgaaatcgaagtaatgcggattgaggccgacccgctg
cgcacgccgcccaccgacgcatcccgcctgggcgaagccatgcactggctgctggaaaac
gcgcacgacggccccgaaggctggcgccccgagcggctcagccaggcgcgcacccgctac
gccctgacgcccgagcaggccagccgcgccgaagcgctggcgcgccgcatcttcaccggc
gaagccgcctgggcgtggtctgccgacgaagtgctgcaggccttcaacgaagtcgagctg
acgcacgacggccagcgcctgcgcatcgaccgcctggtgcgccgccgcgccagcgccggg
cagcccgaagcctggtgggtgctggactacaaaagcgccttccaccccgagcgcgacccg
ctgctgcaggcgcaaatggcccgctaccgcgccgccatcgaacgcctgcaccccggccag
cctgtgcgggtggcgttcttgacgggcgacgggcgcgtggtgggttaa
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