Ottowia oryzae: C6570_17070
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Entry
C6570_17070 CDS
T05363
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
otk
Ottowia oryzae
Pathway
otk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C6570_17070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
otk02022
]
C6570_17070
02035 Bacterial motility proteins [BR:
otk02035
]
C6570_17070
Two-component system [BR:
otk02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
C6570_17070
Bacterial motility proteins [BR:
otk02035
]
Pilus system
Twitching motility proteins
C6570_17070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
AAA
HTH_23
HTH_30
AAA_7
BRCT_3
Motif
Other DBs
NCBI-ProteinID:
AVO35740
UniProt:
A0A2S0MIN5
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All DBs
Position
3733711..3735282
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AA seq
523 aa
AA seq
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MTSPASNPAGARVLVVDDEPDLRTLYELTLLRAGYEVLSAANMAEARDQLAAERFDIVIT
DMRLPDGLGLDLLKELVAQGRPERCIVITAYGSPENAVEALKAGAFDYLTKPVDLKQFRG
VVASAMQAPARAPGFTDSGPARIESGSAHGPAPAPSQPAPLCATPDKSANSAGAQALARM
VGDSPAMRAVKHRIAKVARSMAPVLVQGESGTGKELVAQAVHANSHRSNGPFVPVNCGAI
PENLLEAEFFGARKGSYTGAAADREGFFQAAQGGTLFLDEIGDLPLAMQAKLLRAIQERR
VRPLGETQEEPVDVRIVSATHKDLAAEVQAGRFRQDLYYRLNVIEVIVPPLRERREDLPA
LCQALLARIAADGSGVVPRLTERQMADILSAPLEGNVRELENLLHRAMALGEAGDSGFGE
LPLFDAAHGPAPEMLDIDLTAPHGAGAPTGAGDLPLPETLPEDLEGWLDAQERRVLVRAL
DETGFNRTAAAARLGLNLRQMRYRMSRLGITEPGSDDPGHGDH
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccctgcttccaaccccgccggtgcccgcgtgctggtggtggacgacgaaccc
gatctgcgtacgctgtacgagctgaccctgttgcgcgccgggtacgaggtgctcagcgcc
gccaacatggccgaggcgcgcgatcaattggccgcagagcgtttcgacatcgtcatcacc
gacatgcgcctgcccgacggcctgggcctggatctgctcaaagagctggtggcccagggg
cggcctgagcgctgcatcgtcatcacggcctacggctcgcccgagaatgccgtcgaggcg
ctgaaagccggtgcctttgactacctgaccaagccggtcgatctcaagcagtttcgcggc
gtggtggcctcggccatgcaggcgccggcgcgcgcgccgggcttcaccgacagcgggcct
gcccgcatcgaatcgggctctgcccacggacctgccccagcgccgagccagcccgctcca
ctgtgtgccacgccagacaaatcggccaacagcgccggtgcacaggcactggcgcgcatg
gtgggcgactcgccggcgatgcgtgccgtcaagcaccgcattgccaaggtggcccgcagc
atggcgccggtgctggtgcagggcgaatcgggcaccggcaaagagctggtcgcccaggcg
gtgcacgccaacagccaccgcagcaacggccccttcgtgcccgtgaactgcggcgccatt
cctgaaaacctgctcgaagccgagttcttcggcgcgcgcaagggctcttacacgggcgcc
gcggctgaccgagagggcttctttcaggccgcgcaaggcggcacgcttttcctggacgag
atcggcgatctgccgctggcgatgcaggccaagctgctgcgcgccatccaagagcggcgc
gtgcgaccgctgggtgaaacgcaggaagaaccggtggacgtgcgcatcgtcagcgccacc
cacaaagacctcgcggccgaagtgcaggccgggcgcttccgccaggatttgtactaccgc
ctgaacgtgatcgaggtgatcgtgccgccgctgcgcgagcgccgcgaagacctgcccgcg
ctctgccaggcactgctggcgcgcatcgccgccgatggttcgggcgtcgtgccgcgcctg
accgaacgccagatggccgacatcctctctgcgccgctggagggcaacgtccgcgagctg
gaaaacctgctgcaccgcgcgatggcgctgggcgaggcgggcgattccggctttggcgaa
ctgcccttgttcgacgccgcacacggcccggccccagagatgctcgacatcgatctgacc
gcgcctcacggcgcgggcgcgcccacgggcgccggtgacctgccattgccggagacgctg
ccggaagacctggaaggctggctggacgcgcaagagcgccgggtgctggtgcgtgcgctg
gatgaaaccggcttcaaccgcacggccgccgccgcgcgcctgggcctgaacctgcggcag
atgcgctaccgcatgtcgcgcctgggcatcactgaaccgggcagcgacgaccccggccat
ggcgaccactga
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