Octadecabacter temperatus: OSB_00040
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Entry
OSB_00040 CDS
T04001
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
otm
Octadecabacter temperatus
Brite
KEGG Orthology (KO) [BR:
otm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otm03032
]
OSB_00040 (gyrB)
03400 DNA repair and recombination proteins [BR:
otm03400
]
OSB_00040 (gyrB)
Enzymes [BR:
otm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OSB_00040 (gyrB)
DNA replication proteins [BR:
otm03032
]
Prokaryotic type
DNA Topoisomerases
OSB_00040 (gyrB)
DNA repair and recombination proteins [BR:
otm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OSB_00040 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
Toprim_4
HATPase_c_3
E2_bind
Motif
Other DBs
NCBI-ProteinID:
AKS44573
UniProt:
A0A0K0Y0U9
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All DBs
Position
3951..6368
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AA seq
805 aa
AA seq
DB search
MTDEQNTPEEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADAVNVKIHDDGSVSVSDNGRGIPVDIHKEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSDWLELRIWRDGKEHVARFEGGYTTESLKVVGECGDRTGTEVRFMASL
ETFSNREYSFETLEKRLRELAFLNSGARIIVTDERPAEHLSTELYYEGGVKEFVKYIDRS
KTSILPEPIYVIGEKDDIGVEVAMWWNDSYNEMVLPFTNNIPQRDGGTHMAGFRAALTRT
INSYAASSGIAKKEKINFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVESL
MNEKLAEWFEENPQIAKVVVSKILEAAHAREAARKARDLTRRKTAMDVNFLAGKLKDCSE
KDPSKTEVFLVEGDSAGGSAQTGRDRQTQAILPLKGKILNVERARFDRMLGSQEIGNLVM
ALGTGIGRDEFNIEKLRYHKVVIMTDADVDGAHIRTLLLTFFFRQMPELIERGNLYIAQP
PLYKVSRGKSEVYLKDQAAMDDYLTEQGVEGAMLRQGNGEEIIGADLRRVVDEAGRLKRV
LDAFPTHYPRHILEQAAIAGAFVSGAVEADLQGVADRVAARLDLIANEWERGWQGRITQD
KGVRLTRILRGVEEVRTLDGPMLRGGEARKTGSFTQHLQEVYNTPATLIRKDRVQNIYGP
LDLLKAILEEGERGLSLQRYKGLGEMNPDQLWETTLDPDARTLLQVKVEDVAEADDLFTK
LMGDVVEPRREFIQDNALNVEHLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagcagaatacaccagaagagtatggcgctgattccatcaaagttctcaaa
ggcttagaggcggttcgaaagcgtccaggcatgtacatcggtgacaccgatgatggctcc
ggtttgcaccatatggtctacgaagtcgtcgataacggtatcgatgaagctttggcaggc
catgcggacgctgtgaacgtcaaaattcatgatgacggttctgtttctgtgtctgataac
ggtcgcggaattcctgtcgacatccacaaagaagaaggcgtttctgccgccgaagttatc
atgacccagctgcacgctggcggtaaattcgacagcaactcctacaaggtttccggtggt
ctgcacggcgttggcgtatccgttgtgaacgccctgtctgactggctcgaactgcgcatc
tggcgcgacggcaaagaacacgtcgcacggttcgagggtggctatacaaccgagtcactc
aaggtcgtcggtgaatgcggtgatcgcacaggtaccgaagtgcgtttcatggcgtccctc
gaaacattctcaaaccgcgaatattccttcgagacgctggaaaagcgcctgcgcgaactg
gcgttcctgaactccggcgcacgcattatcgtcaccgacgaacgccctgccgaacatctc
agcacagaattgtactacgaaggcggcgtcaaagaattcgtcaagtacatcgaccgttcc
aagacctcgatcttgcccgaaccgatctacgtgatcggcgaaaaggacgacatcggcgtc
gaagtcgcgatgtggtggaacgacagctacaacgaaatggtgctgccctttaccaacaac
atcccgcagcgcgacggcggcacgcacatggccggcttccgcgcggccctgacccgcacc
atcaacagctacgcggcttccagtggcatcgccaaaaaggaaaagatcaactttacaggc
gatgacgcccgtgaaggcctgacctgtgttctgtccgtcaaagtgccggacccgaaattc
tcgtcccagacaaaagacaaactcgtctcgtctgaagtgcgccccgccgttgaatctttg
atgaacgaaaagctggccgaatggttcgaagagaacccacagatcgccaaggtcgtcgtc
tccaaaattcttgaggccgcccacgcccgcgaagccgcgcgcaaagcccgcgacctgacg
cgccgtaaaacggcgatggatgtgaacttcctcgcaggtaagctcaaagattgctctgaa
aaagacccatccaaaaccgaagtcttcttggtggagggtgattccgctggtgggtccgcc
caaacagggcgtgaccgtcaaacgcaggccatcctgccgctgaagggtaaaatcctgaac
gttgaacgcgcgcgttttgaccggatgctcggctctcaggaaatcggcaacctcgtcatg
gcgcttggcactggtatcgggcgcgacgaattcaacatcgaaaaactgcgctaccacaag
gtcgtcatcatgaccgatgccgatgttgacggggcgcacatccgcacgctgctgctgacg
ttcttcttccggcagatgccggaactgatcgaacgcggtaacctctacatcgcgcagccc
ccgctctacaaagtcagccgcggcaagtccgaggtgtacctcaaagaccaagccgcgatg
gatgactatctgaccgaacaaggtgtcgaaggcgcgatgctgcgtcagggcaatggcgaa
gaaatcattggtgccgacctgcgtcgcgtcgtcgatgaggctggccgcctaaagcgcgta
ctcgatgcgttcccgacccactatccacgtcacatccttgaacaagccgccatcgcaggc
gccttcgtttctggcgcggttgaggccgatttgcagggcgtggctgaccgtgttgccgcg
cgtcttgatctgattgccaacgaatgggaacgcggctggcaaggccgcatcacccaagac
aaaggcgtgcgtctgacccgcatcctgcgcggcgtcgaagaagtccgcacgttggacggc
ccaatgttgcgcggcggcgaggcccgcaaaacgggatccttcacccagcacctgcaagag
gtctacaacacgcctgcaacgctgatccgtaaagaccgtgtgcaaaacatttacggccct
ctcgatctgctcaaggcgatcctagaggaaggcgaacgcggcttgtcgcttcaacgctac
aagggactgggcgagatgaaccccgaccagctctgggaaaccacattggacccagacgcc
cgaacgcttctgcaggttaaagtcgaagacgttgccgaagccgacgacctgttcaccaag
ctgatgggcgacgtcgttgaaccgcgccgcgagttcatccaagacaacgcgttgaatgtg
gaacacctcgacttctaa
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