Octadecabacter temperatus: OSB_00200
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Entry
OSB_00200 CDS
T04001
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
otm
Octadecabacter temperatus
Pathway
otm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSB_00200 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otm03019
]
OSB_00200 (recQ)
03400 DNA repair and recombination proteins [BR:
otm03400
]
OSB_00200 (recQ)
Enzymes [BR:
otm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OSB_00200 (recQ)
Messenger RNA biogenesis [BR:
otm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OSB_00200 (recQ)
DNA repair and recombination proteins [BR:
otm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OSB_00200 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
ResIII
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
AKS44589
UniProt:
A0A0K0Y0X2
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All DBs
Position
20253..22286
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AA seq
677 aa
AA seq
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MSAATLLRDVFGFDGFRPGQQEIVEAVTDGKNTLAIMPTGGGKSLCFQLPALVRDGVTVV
ISPLIALMRDQVRGLKEAGVVAGALTSGNTEEETDEVWRNLENGTLKLLYIAPERLASNG
AQRMLRQAGVSMIAVDEAHCVSQWGHDFRPDYLRIGDLRRDLDVPLAAFTATADAETRDE
IVAKLFGDHPPEIFLHGFDRPNIHLAFAAKDGPRAQILNFANVRREQAGIVYCGTRAKTE
TLAKALRDAGHSACHYHGGMEADDRRHVERRFQQEDGLIVCATIAFGMGIDKPDIRWVAH
ADLPKSIESYYQEIGRAGRDGAPAETLTLFGPDDIRYRRQQIDEGLAPPERREADHGRLN
ALLGLAEALHCRRQNLLSYFGEDPAPCGHCDLCDKPADVFDGTTPVRMALSAALRTEERF
GAGHLIDILQGNMTEKVAQRSHDQLPTFGVGKEYSRVQWQAIFRQMMGHDLMRPDAERHG
ALRMTQKARPILRDEATIDLRRDTIKSAKSGPKIKQMVSEEDAPLLSALKAKRRAFAEQL
GGPAYIVFNDKTLIEMAEKRPATLDDMARIGGVGTKKLDSYGAAFLEVINGEAEALHPKR
QKLAGRTEGTIYDRLLEVQADLSRGPEGTDKPMSCSASQLAKVASQKPSDVQSITRLLGD
RHADRFGTAFLSVLRDV
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgccacgcttcttcgcgacgtcttcggctttgacggtttccgtccgggccaa
caagagatcgttgaggcggttaccgacggcaaaaacactctcgcgatcatgccgacgggt
ggcggtaaatccctatgcttccaacttccggcgttggttcgtgatggcgtaacggtcgtg
atctccccgctcatcgccctcatgcgcgatcaagtgcgtggactgaaagaggctggtgta
gttgcgggtgcgctcacatccggaaacaccgaagaagagaccgatgaggtttggcgtaac
ctggaaaacggtacgctaaagcttctctatattgccccagaacgcctcgcgtcaaacggt
gcgcaacggatgttgcggcaagccggcgtgtcgatgattgccgtggacgaggcgcattgt
gtttctcaatgggggcacgatttccgcccagattatttgcgtatcggtgatctacgtcgc
gatcttgatgtcccgcttgcagcctttaccgccacggcagatgccgaaacccgcgatgag
atcgtcgccaaactattcggggatcatcccccggaaattttcctacacggatttgatcgc
cccaacatccacctcgcgtttgcagccaaagacggtccgcgcgcccagattctgaacttc
gccaatgtccgtcgtgaacaagcaggcatcgtttactgcgggacgcgtgccaaaaccgaa
acgctggccaaagcgctgcgcgacgctggccattcagcatgtcactatcacggtggaatg
gaagccgatgatcgtcggcacgttgagcgccgattccagcaggaagacggtctgatcgtc
tgtgcgacaatcgcgttcggaatgggcatcgataaaccagatatccgctgggtcgcccac
gctgatctgcctaaatctattgaatcctactaccaagaaatcggtcgcgctgggcgtgac
ggtgcgcccgctgaaaccctcactctgtttggccctgatgacattcgttaccgccgacaa
caaattgacgagggccttgcgccaccagaacgccgcgaagcagatcacggtcgcctgaat
gcgctcctcgggcttgccgaagcactacactgtcgtcgccaaaacctgctttcgtatttt
ggcgaagatccagccccctgcggtcactgcgacctttgcgacaaacccgcggatgttttc
gatggaacgacgccggttcgcatggctctgtctgctgctttgcgaactgaagaacggttc
ggcgcggggcacctcatcgatatcctgcaaggcaatatgacggaaaaggttgcccagcgt
agtcacgaccaactaccgacatttggcgtcggcaaagaatacagccgcgttcaatggcag
gcgatctttcgacaaatgatgggccatgaccttatgcgcccagatgcggaacgccacggt
gcgctgcggatgacgcaaaaagcgcgcccgatattgagagacgaggcaaccatcgacctt
cgccgtgacacaatcaaatcggccaaatccggccccaagatcaaacaaatggtgtccgaa
gaagatgcgccattgttgtccgcgctcaaggcgaaacgccgcgcatttgcggaacagctt
ggcgggccggcctatatagttttcaacgacaaaaccctcattgaaatggcggaaaaacgc
cccgcgacgctggacgacatggcccgtattggcggtgtcggcaccaagaagctcgacagc
tatggcgcggcatttttggaggtcatcaacggcgaggcagaagccctccatccgaaacgc
caaaaactcgcagggcgaactgaaggcacgatttacgatcgcctcctcgaagtacaggct
gacctttcacgcgggcccgaaggcacggacaagcccatgtcctgctccgcgtcgcaactc
gccaaggtcgccagccaaaagccaagcgatgttcaatcaattacccgcctactcggggac
cgccacgcggaccgctttggaaccgcatttctttcggtgctacgtgatgtttaa
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