Octadecabacter temperatus: OSB_05500
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Entry
OSB_05500 CDS
T04001
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
otm
Octadecabacter temperatus
Pathway
otm03030
DNA replication
otm03430
Mismatch repair
otm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
otm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OSB_05500 (dnaE1)
03430 Mismatch repair
OSB_05500 (dnaE1)
03440 Homologous recombination
OSB_05500 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otm03032
]
OSB_05500 (dnaE1)
03400 DNA repair and recombination proteins [BR:
otm03400
]
OSB_05500 (dnaE1)
Enzymes [BR:
otm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OSB_05500 (dnaE1)
DNA replication proteins [BR:
otm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OSB_05500 (dnaE1)
DNA repair and recombination proteins [BR:
otm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OSB_05500 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Scaffold
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AKS45113
UniProt:
A0A0K0Y2E6
LinkDB
All DBs
Position
508537..512040
Genome browser
AA seq
1167 aa
AA seq
DB search
MADPRFIHLRTHTEYSLLEGAVPVKTLSGLAAKAGMPAVAVTDTNNLFCALEFSEYAAKA
GVQPIIGCQIDFGMGTDEPGRRPEPPAPLVFLAQNEAGYLNLMKLNSCAYLDANGELPQV
SLDDLAKHSEGLICLSGGPDGPIGRLLRAGQRPAAEALMTKLAATFPDRLYVELQRHPVD
GGLPEAEQLSEQGHVEMAYAMDLPLVATNDVYFPKAAIYEAHDALICIADGAYVDQNEPR
RRLTPQHYFKSQEEMVTLFADLPEAVANTVEIAKRCGFKVYKRDPILPKFADDEVAELRR
QAEAGLKDRLAIIPHAADVAEYEKRLDFELGIIEGMGFPGYFLIVADFIKWSKDNNIPVG
PGRGSGAGSLVAYALLITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYVQ
EKYGRDKVGQIITFGALLSKAAVRDVGRVLQLPYGQVDKLSKMIPVEGVKPVSIVKALAD
EPRLREAANNEEVVDRLLTYGQQLEGLLRNASTHAAGVVIGDRSLDELVPLYQDPRSDMP
ATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAIDLIRKSGRDIHTAADGTELYVPAEGAVN
EINAIPLDDEASYKLYAAAKTVAVFQVESSGMMDALRRMKPDCIEDIIALVALYRPGPME
NIPKFCEVKNDISDRDTLHPSIDHILDETQGIIVYQEQVMQIAQEMAGYSLGGADLLRRA
MGKKLQEAMDAEKPKFISGAAENGVDKKKAQEVWDLLDKFANYGFNKSHAAAYAVVSYQT
AWLKANHPVEFMAGVMNCDIHLTDKLAVYFQEVKKGLELPWKPPCVNTSLATFDVQDGAL
VYGLGGLKNVGADAMGLIVDARLAEGAKAFSTLFDLARRVDLKRVGKRPLEMLARAGAFD
VLDPNRRKVLGGLDALVGYSAAIHDQKNSNQVSLFGEAGDDLPEPRLPACEDWLPAERLA
EEFKAVGFYLSGHPLDDYLAPLKRKGVLTLDEVTAKAERGAHVAKMAGTVAGRQERKSAR
GNRFAFVQLSDPTGQYEVTMFSDALEASRDFLETGAQVVLSVEATMESEQLKLLGRSVSP
IDLAVADAGSTGLRVFLGDIAAIPTVDEILQNAIRDKVKGGRGPITFTIDDAELGEIDVE
LGAEFPVNPQIKGALRSLSGVIEVQEI
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccacgattcatacacctgcgcacgcatacagaatactcacttcttgagggg
gcggttcctgtaaaaaccctgagtgggcttgcagcaaaggctgggatgcctgcggtggcc
gttacggacaccaacaacctgttttgtgcactggaattttccgaatatgcggcgaaggct
ggagttcagccaatcattgggtgtcagattgattttggaatgggcacggatgaacccggt
cgtcgccctgagccgcccgcaccgctggtttttctggcgcagaatgaggcgggttacctg
aacctcatgaagctaaactcatgtgcgtacttggatgcgaacggggagctgccgcaagtt
tcactcgatgatttggcgaaacattccgagggtttgatttgtctgtctggtgggccggac
ggacctatcgggcggctattgcgcgctgggcaacgccccgctgccgaggctttgatgacc
aaactggccgcgactttcccagatcgtttgtatgtggaactgcagcgccaccccgttgat
ggcggcctgcctgaggctgaacaattgtcggagcaaggccatgtcgaaatggcctacgcg
atggatttgccgttggttgcgaccaacgatgtctatttcccaaaggccgcaatctacgaa
gcgcatgatgcgttgatctgtatcgcagacggtgcctatgtcgaccaaaacgagccccgc
cgccgcttgacgccgcagcactacttcaagtcgcaagaagaaatggtcacgctgtttgcg
gaccttccagaagccgtcgccaataccgttgaaatcgccaaacgttgcggtttcaaagtt
tacaaacgcgatccaattttgcccaaatttgccgatgacgaggtcgcagaactgcgccgt
caggccgaagcgggactaaaggaccgtctggcgattatcccccatgcggccgacgttgct
gagtacgagaagcgcctcgattttgaactcggcatcattgagggcatggggttccccggc
tacttcttgatcgttgcggacttcattaaatggtccaaggataacaacatcccagtcggt
ccgggccgtgggtctggtgcggggtctttggtggcctatgcgctgctgatcaccgatctt
gatcctttgcggtattccttgctgtttgagcggttcttgaaccccgaacgtgtgtccatg
cccgatttcgatatcgatttttgcatggatcgccgcgaagaggtcattcgctacgttcag
gaaaaatatggccgcgataaggtaggccagatcatcacctttggtgcgctattgtccaaa
gccgccgtacgcgatgttgggcgtgttttgcagctgccgtacgggcaggtcgataaactg
tccaagatgatccccgtggaaggcgtcaaacctgtcagcattgttaaggcgctggcggat
gagccgcgcctgcgcgaagcggcgaacaatgaagaagttgtcgaccgcttgctgacctat
gggcagcagttagaaggcttgctgcgcaacgcatcgacccacgcggcgggtgttgtgatt
ggcgaccgttcgctcgatgaacttgtgccgctctatcaagatccgcgttctgatatgccc
gcgacccagttcaacatgaaatgggttgagcaagcaggcctcgttaagtttgatttcttg
ggtctgaaaacgctgacagtgatccagaacgcgattgacctgatccgcaagtcgggccgc
gatattcatacggccgcagatggaacagaactatatgtgcccgccgaaggtgcagtgaat
gaaatcaacgcgattccgctggacgatgaagcgagctataagctttacgccgccgccaaa
accgtggccgtgtttcaggtggaatccagcggtatgatggatgcgctgaggcgcatgaaa
ccggattgtatcgaggacattatcgcgctggtggcattgtatcgccccggcccgatggag
aacattccgaagttctgtgaagtgaagaacgacatttcggatcgcgacacgctgcatccg
tccatcgaccacattctcgacgaaacccaaggcatcatcgtttaccaagaacaggttatg
cagatcgcccaagaaatggcgggctactcgcttggtggcgctgacttgttgcgccgcgcg
atgggtaaaaagctgcaagaggcgatggacgccgagaagccgaagttcatttccggtgcc
gctgaaaacggtgtcgataagaagaaagcgcaggaagtctgggacctgctggataagttc
gcaaactacggtttcaacaaatcccacgcggcggcctatgcggtggtcagctaccaaacc
gcgtggctaaaggcgaaccatccggttgaattcatggccggcgtgatgaactgcgatatc
cacctgacggacaaactggcagtgtatttccaagaagtgaagaaggggcttgagctgcct
tggaagccaccttgcgtgaacacatcgctcgccacgtttgacgtgcaagatggcgcgttg
gtctatggccttggtggtctgaaaaatgtcggcgcggatgcgatgggccttatcgtggat
gcgcgattggcagagggtgcgaaggcgttctcgacgctgtttgatcttgcccgccgcgtt
gatctgaaacgtgtcggtaaacgcccacttgaaatgttggcccgcgcgggtgcgtttgat
gtactggatccgaaccgccgcaaagtgctgggtgggttggatgcgctggttgggtattcc
gcggcgatccatgaccagaagaattccaatcaggtgtcgttgtttggtgaagctggcgat
gatctgccagaaccgcgcttgcctgcgtgcgaggactggttgcctgctgaacggcttgcc
gaagaattcaaagcggttgggttctacctgtccggccacccgctggatgactaccttgcg
ccgctaaaacgcaaaggcgtgctgacccttgatgaggtgacagccaaggctgaacgcgga
gcgcacgtcgctaaaatggcgggcacagtggcggggcgtcaggaacgcaaatccgcacgc
ggcaatcgtttcgcgtttgttcagctttctgatccaacgggtcagtacgaggtcacgatg
ttcagtgatgcgctagaagcctcgcgcgattttctggaaacgggtgcgcaagttgtccta
agcgtcgaagccacgatggaaagcgaacaactgaaactcctcgggcggtcggtgtcgccg
attgatttggcagtggctgatgctggctcaaccggtttgcgggtgttccttggggatatc
gcggcaatcccgacagtcgatgaaatcctgcaaaacgcgatccgcgacaaggttaagggt
gggcgtgggccgatcacatttaccattgatgatgccgaactgggcgagattgacgtggaa
cttggcgctgaattccctgtgaacccgcagatcaaaggtgcgttacgcagccttagcggt
gtcatcgaagtgcaagaaatctaa
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