Octadecabacter temperatus: OSB_07450
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Entry
OSB_07450 CDS
T04001
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
otm
Octadecabacter temperatus
Brite
KEGG Orthology (KO) [BR:
otm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otm03032
]
OSB_07450 (topA)
03400 DNA repair and recombination proteins [BR:
otm03400
]
OSB_07450 (topA)
Enzymes [BR:
otm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OSB_07450 (topA)
DNA replication proteins [BR:
otm03032
]
Prokaryotic type
DNA Topoisomerases
OSB_07450 (topA)
DNA repair and recombination proteins [BR:
otm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OSB_07450 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AKS45306
UniProt:
A0A0K0Y359
LinkDB
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Position
complement(703230..705875)
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AA seq
881 aa
AA seq
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MPVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPPKDGSVDPDNEFDMLWEIASDSKK
HIKAIADALANDNELILATDPDREGEAISWHLEEALRKRKSIKKDTPVSRVVFNAITKSA
VTEAMKNPRVVDQPLVDAYLARRALDYLVGFKLSPVLWRRLPGAKSAGRVQSVTLRIIVE
REMEIEAFNNREYWSVKAQLQTPRNQSVDARLTVLAGKKLEKFDLENQTQAELAQQAVQS
RDLSVKKVEAKPANRNPSAPFMTSTLQQEASRKFGFGARMTMNAAQRLYEAGLITYMRTD
GIDMAPEAVTEAREAIAAKFGKDYVPSSPRIYKNKAKNAQEAHECVRPTDLMKDAEAAKI
ADPDQKKLYDLIYKRTISSQMEAARMERTTVDIGSDDGQVELRATGQVVLFDGFLAVYEE
GRDDEDDKVVDDDDKRLAQMAEGDAITKTSVTPEQHFTQPPPRYTEATLVKRMEELGIGR
PSTYASIVTTIQDREYVRKDKNRLIPEDKGRLVTAFLTNYFRKYVGYDYTASLEEELDHV
SAGDADYKKVLADFWGDFKVTIDEAMDNSITEVLDKINEVLAPHIFPPNEEGTDPRLCPN
CGNGRLSMRTARAGGAFIGCSNYPECKYTRAFGPPGAEDASGIPPEGKMLGEDDGDKIWI
HKGRFGPYAQRGEVTEDNKKPNRQSIPKEWPPEEVTLETAVKLLSLPRFIGTHPEDGVNV
FANIGRYGPYLKHAESTSDRGGTNANLESLEDVFTVGMNHAVELLAAKVASRGQRGKAAV
PVRELGEHPDVGGPVNVFDGKYGPYVKWDKINATIPDTIEVADLTLSQAVTLIEERAAKA
GKKVARKAPAKKKAPAKKATAKKKPAAKKATTKKKASPKKD
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgttgtcgtcgagtctccggctaaggccaagacaatcaacaagtatttaggg
tccgactatacagtcttggcctcatacgggcacgtccgtgacctgccgccaaaagacggt
tctgttgatccagacaacgaattcgacatgctttgggagatcgcaagcgactcgaaaaag
catatcaaagccattgcagacgctttggcgaacgataacgaactgatcctcgcgaccgac
cccgaccgcgaaggggaagcgatttcttggcacctcgaagaggcgttgcgcaaacgcaag
tcgatcaagaaagacacccccgtttcgcgcgtcgtatttaacgccatcaccaaatccgcc
gttactgaggcgatgaaaaacccgcgcgttgtcgatcagcccttggttgacgcctatctc
gcgcggcgcgcgttggactaccttgttgggtttaaactcagccctgttttgtggcgccgc
ctgcctggtgcgaagtctgcgggccgcgttcagtcagtcactttgcgcatcatcgttgag
cgtgagatggaaatcgaagcgtttaacaaccgcgaatactggtccgtaaaagcccagctg
cagacaccgcgcaaccaatccgttgatgcgcgcttaactgtgcttgctggtaaaaagctg
gaaaagtttgatcttgaaaaccaaacgcaggcagaactggcgcaacaagcagtgcagtcc
cgcgacctgagcgtcaaaaaggtcgaagcgaaacctgcgaaccggaacccatccgcaccg
ttcatgacatcgacgttgcagcaagaagccagccgtaaattcggcttcggcgcacgtatg
acaatgaacgcggcccaacgtttgtacgaagcgggccttatcacatacatgcggaccgac
ggcatcgatatggcacccgaagcggtgactgaagcgcgcgaagcgattgctgccaaattc
ggcaaggactacgtgccgtccagcccacgcatctacaagaacaaagcgaagaacgcccaa
gaggcgcacgaatgtgtgcgccctacggacctgatgaaggacgcagaagcggctaaaatc
gctgatcccgaccagaagaaactctacgatctcatctacaagcgcaccatctcaagccag
atggaagctgcgcgtatggaacgtaccacggtcgatatcggctcggatgatggtcaggtc
gaactgcgggcgacagggcaagttgtactatttgacggcttccttgctgtttacgaagag
ggccgcgacgacgaagacgacaaggtcgtggatgacgacgacaagcgtttggcgcagatg
gctgaaggtgacgctatcaccaaaacgtccgtcacgcctgagcagcatttcacgcagccg
cccccgcgctacaccgaggccactttggtcaaacggatggaagagctcggcatcggccgc
ccgtccacctacgcgtccattgtgacaacaattcaagatcgcgagtatgttcgcaaagac
aagaaccgccttatccccgaggacaaaggccgcctcgttacggcgttcctgaccaactat
ttccgtaaatatgttggctacgactacaccgcgtcgctggaagaagaactagatcacgtc
agcgcaggcgatgccgactataagaaggtattggccgacttctggggcgacttcaaagtc
accatcgacgaagcgatggacaattccatcaccgaagttcttgataaaattaacgaagtt
cttgcgccacatatcttcccaccgaatgaggaaggcacagacccacgactttgccccaac
tgtggcaatggtcgtttgtccatgcgcacggcccgtgccggcggcgcgttcatcgggtgt
tccaactaccctgaatgtaaatacacccgtgcgttcggccctcctggtgccgaagatgca
tcaggcattccaccagaaggtaagatgcttggcgaagacgacggcgacaaaatctggatc
cacaaaggtcgctttggcccgtatgcccagcgtggcgaggtcacagaagacaacaaaaag
ccgaaccgccagtctattcccaaggaatggccgcccgaagaagtcacgctggaaacagca
gttaaattgctgtctctgccccgtttcatcggcacccaccccgaagatggcgtaaacgtt
ttcgcaaacatcggtcgctatggcccgtatttgaaacacgcagaatccacgtcggatcgc
ggtggcaccaatgcgaacctcgaaagccttgaggatgtgtttacggttggtatgaaccac
gctgttgaactgctggccgccaaggttgccagccgtggccaacgtggcaaagccgccgtg
cctgtgcgcgaattgggtgaacaccctgatgttggcggaccggtaaatgtgtttgatggc
aaatatggcccctacgtgaaatgggacaaaatcaacgcaacgatccccgatacgatcgaa
gtcgctgatctgacgttgtcacaagcggtaacgctcatcgaggaacgtgcagctaaggct
ggcaagaaagtcgcacgaaaagcgcccgctaagaaaaaggcgcctgcgaaaaaggccaca
gccaagaaaaaaccggcagcaaagaaggcgacaaccaagaagaaagcaagccccaagaaa
gattga
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