Octadecabacter temperatus: OSB_09380
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Entry
OSB_09380 CDS
T04001
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
otm
Octadecabacter temperatus
Brite
KEGG Orthology (KO) [BR:
otm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otm03021
]
OSB_09380 (rpoH)
Transcription machinery [BR:
otm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OSB_09380 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
UCR_14kD
Sigma70_r3
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AKS45496
UniProt:
A0A0K0Y3N6
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All DBs
Position
883584..884480
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AA seq
298 aa
AA seq
DB search
MSSYTNLPAPSPEQGLNRYMQDIRKFPMLEPDEEYMLAKRWVDHEDTEAAHKMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYVLRS
WSMVKLGTTSAQKKLFFNLRKAKNRIGALEEGDLRPENVQRIANDLGVTEDEVVSMNRRM
SGGDASLNATVGSEGEGTMQWQDWLEDESADQAGDYEAKDELDMRRELMAEAMDVLNDRE
KDILMQRRLMEKAITLEELSGQYDVSRERIRQIEVRAFEKLQKKMQTLARERGMLENA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttatacaaatctaccggccccgtcgccggaacaaggtctgaaccgctacatg
caggacatccgcaagtttccaatgctggaaccggatgaagaatacatgttggccaaacgc
tgggtggaccacgaggacaccgaagctgcgcataaaatggtaacatcgcacctgcgattg
gcggccaagattgcgatggggtaccgtggatacggcctgccgcaagccgaagtgatctct
gaggcgaatgtcggcctcatgcaggctgtgaaacgctttgaccctgaaaagggctttcgc
cttgcgacctatgcgatgtggtggatccgtgcgtccatccaggaatacgtgctgcgcagc
tggtcaatggtcaagctgggcacaacatccgcgcaaaagaagctgttcttcaacctgcgc
aaagccaagaaccgtattggcgcgctggaagagggcgatctgcgccctgagaacgtgcag
cgcattgccaatgacctaggggtgactgaggacgaagttgtgtccatgaaccgccggatg
tccggtggggacgcatccctgaacgcgacagtcgggtctgaaggcgaaggtacgatgcaa
tggcaagattggttggaagacgaatccgctgaccaagccggtgattatgaagccaaagat
gagttggacatgcgccgcgagttgatggccgaagcgatggatgtgttgaatgaccgtgaa
aaggacattctgatgcagcgccgcttgatggaaaaagccatcacgcttgaagaattgagc
ggccaatatgacgtcagccgcgaacgcatccgccaaatcgaagtgcgcgcgtttgaaaag
ttgcaaaagaagatgcaaacgctcgcccgtgagcgtggcatgctagaaaacgcttaa
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