KEGG   Octadecabacter temperatus: OSB_16410
Entry
OSB_16410         CDS       T04001                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
otm  Octadecabacter temperatus
Pathway
otm00230  Purine metabolism
otm00240  Pyrimidine metabolism
otm01100  Metabolic pathways
otm01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:otm00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    OSB_16410 (nrdJ)
   00240 Pyrimidine metabolism
    OSB_16410 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:otm03400]
    OSB_16410 (nrdJ)
Enzymes [BR:otm01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     OSB_16410 (nrdJ)
DNA repair and recombination proteins [BR:otm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    OSB_16410 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: AKS46190
UniProt: A0A0K0Y5G2
LinkDB
Position
complement(1609944..1613618)
AA seq 1224 aa
MKIERNFTKSGQDAYAEVAFKSATSEIRNPDGTIVFKLDDCQIPEAWSQVASDVIAQKYF
RKAGVPSETVKVEEKGVPEFLWRSVPAEGAEMSGEISAKQVFDRLAGAWAYWGWKGGYFS
TEEDAKTYFDEMRYMLATQRAAPNSPQWFNTGLHWAYGIDGPAQGHHYVDYQTGKLTASK
SSYEHPQPHACFIQSVADDLVNEGGIMDLWVREARLFKYGSGTGTNFSSLRAAGENLSGG
GKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVIVDADHPDIEEFINWKVLEEQKVASIV
AGSKMHEDKLNLIFDAIKGWDGAEADAYDPKVNPQLKDAVREAKKVAIPETYVKRVLDYA
KQGHTSIEFPTYDTDWDSEAYNSVSGQNSNNSIRVTDAFLKAVEEDANWKLINRKNGEVH
KVIKARDLWEQVGHAAWACADPGIQYHDTVNAWHTCPEDGAIRGSNPCSEYMFLDDTACN
LASMNLLTFYENDEFQVEDYMHASRLWTVTLEISVMMAQFPSKEIAQRSYDFRTLGLGYA
NIGGLLMNMGYGYDSDEGRSLAGALTAIMTGVSYATSAEIAGELGAFSGYERNKEHMLKV
IRNHRNAAYGASDGYEKLDVKPVPLDHANCPAAGLIDIAMSTWDEALKLGEKHGYRNAQV
SVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINQSVPAALAKLGYTTSQAE
EIQAYAVGHGTLGNAPGINHTALVGQGFSQVEIDKIEAALPSAFDIRFVFNQWTLGEEFC
TKVLGIPADKLNDPTFDLLKSLGFSKEETDLANDHVCGTMTLEGAPHLKEEHYTVFDCAN
PCGKKGKRFLGVESHITMMAAAQSFISGAISKTINMANDATIEDCQKAYELSWSLGIKAN
ALYRDGSKLSQPLAAALIEDDEEAAEILENGNITEKAQVIAEKIIEKVVVKEIIKSHREK
MPQRRKGYTQKANVGGHKVYLRTGEYEDGNLGEIFIDMHKEGAGFRAMMNNFAIAVSVGL
QYGVPLEEFVDAFTFTKFEPAGMVQGNDSIKNATSILDYIFRELAVSYLDRTDLAHVKPE
GASFDDLGRGEEEGVSNIQEMSETAASKSLEVLKQISSTGYLRKRVPNDLVVLQGGAGAV
AFGGGDASAALDTLVPAVAAGGGMAQAVSSTTAVSSGTVGLSARDKAKMQGYEGEACGEC
GNYTLVRNGTCMKCNTCGGTSGCS
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgaaaattgaacgcaacttcacgaaatctggacaggacgcatacgcagaagtggcattt
aagtccgccacgtccgaaatccggaacccagacggaacgatcgtcttcaaactagatgac
tgtcagattcccgaagcgtggtcacaagttgcgtcagacgtcatcgcacagaaatacttc
cgcaaagcgggcgtgccatctgaaaccgtcaaagtagaagagaagggcgttcctgaattc
ctatggcggtctgttcctgctgagggcgctgagatgtccggcgagatttccgccaagcaa
gttttcgatcgtctcgcaggtgcgtgggcgtattggggttggaagggtggctatttctcc
actgaagaagacgccaaaacctattttgacgaaatgcgctacatgttggcgacgcagcgc
gcggcgccaaactctccacagtggttcaacacaggcctacactgggcttacggcatcgat
ggtcctgcacagggtcaccactatgttgactaccaaactggcaagctgacagcgtctaag
tcctcgtacgagcacccacagccccacgcgtgcttcattcagtccgttgctgacgatttg
gtcaatgagggcggcatcatggacctgtgggtacgtgaagcgcgtttgttcaagtacggt
tccggcactgggacgaacttctcctcgctgcgcgcagctggcgaaaacctctcaggtggc
ggtaagtcttctggtcttatgggtttcctgaaaatcggtgaccgtgcggctggcgcgatc
aagtctggtggcacaacacgtcgtgcggcgaagatggttatcgttgacgcggaccaccct
gatatcgaagagttcatcaactggaaggtcttggaagagcagaaagttgcttccattgtt
gccggttccaagatgcacgaagacaaactaaacctgatctttgatgcgatcaaaggttgg
gacggcgcagaggccgacgcttacgaccctaaggtaaacccacagttgaaagacgccgtg
cgcgaagccaaaaaggtcgcaattccagagacatacgttaagcgcgtcttggactatgca
aagcagggccacacatccatcgaattcccaacgtacgacacggactgggattctgaagcc
tacaactctgtttccggtcagaactctaacaactccatccgcgtaacagacgctttcttg
aaagctgttgaagaagacgcgaactggaagctgatcaaccgcaaaaacggcgaagttcac
aaggtcatcaaggcacgtgatctttgggagcaagttggccacgctgcatgggcttgcgct
gatccaggcatccagtaccacgacactgtcaatgcatggcacacctgcccagaagatggt
gcgatccgcggatccaacccatgttccgagtacatgttccttgacgacacggcctgtaac
cttgcctcgatgaacctgctgacgttctacgagaacgatgagttccaagttgaagactac
atgcacgcgtcccgcctttggacggtgacgctggaaatctcagtaatgatggcgcagttc
ccgtccaaggaaatcgcgcagcgttcttacgacttccgcacattgggccttggctatgca
aacatcggcggcttgctgatgaacatgggctacggctacgattcagacgaagggcgttcc
ttggctggcgcactgaccgcgatcatgactggcgtttcctacgcaacatccgctgaaatc
gctggcgagcttggcgcgttctctggatatgagcgcaacaaagagcatatgctcaaggtt
atccgtaaccaccgcaacgcggcctacggtgcatccgatggctatgaaaagctggacgtt
aagcctgttccacttgatcacgccaactgcccagccgctggcctgatcgacatcgcgatg
tccacatgggacgaagcgctgaagcttggtgaaaagcacggttaccgcaatgctcaagtg
tccgttatcgcgccaaccggcaccatcggtctggtgatggactgtgacacaaccggtatt
gagcctgacttcgcactggtgaagttcaaaaagctcgctggtggtggttactttaagatc
atcaaccaatccgttccggcggctttggcgaaactgggctacacaacgtcccaagctgaa
gaaattcaggcttacgcggttggccacggcacattgggcaacgcaccgggcatcaaccac
accgccctcgtgggccaagggttcagccaagttgagatcgacaagatcgaagccgcgctt
ccatctgctttcgatattcgcttcgtgttcaaccagtggacgctgggcgaagagttctgc
accaaagtcctcggcattccagccgacaagctgaacgacccgacgtttgatctgttgaaa
tccttgggcttttcgaaggaagaaacagacctcgcgaacgaccacgtatgcggcacgatg
acactggagggtgcgccgcacctgaaagaagagcactacacagtgttcgattgcgccaac
ccatgcggtaaaaaaggtaagcgtttcttgggcgttgaaagccacatcacgatgatggct
gcggcacaatcgttcatctcgggtgcgatttccaagacgatcaacatggcgaatgacgca
acgatcgaggactgccagaaagcgtacgagctgtcttggtccttgggcatcaaagcgaac
gctttgtaccgcgatggttccaaactgtcccagccattggctgccgcgttgattgaagac
gatgaagaagctgccgaaatccttgagaacggcaacatcaccgagaaggcgcaagtgatc
gccgagaagatcatcgaaaaggtcgtcgtcaaagagatcatcaagtcgcaccgcgaaaag
atgcctcagcgtcgtaagggctacacacaaaaagccaatgttggcggccataaagtgtac
ctgcggactggcgaatatgaagacggcaacctcggcgaaatcttcatcgacatgcacaaa
gaaggcgcaggcttccgcgccatgatgaacaacttcgctatcgcggtgtctgttggtctt
cagtacggcgtgccgctagaagaattcgttgacgcgttcacattcaccaagttcgagcct
gcgggcatggttcagggcaacgacagcatcaagaacgcaacgtcgatcctcgactacatc
ttccgcgaattggctgtgtcctatctcgatcgcaccgatttggcccatgtgaagccagaa
ggcgcatccttcgatgaccttggccgtggcgaagaagaaggcgtgtccaacattcaggaa
atgtcggaaacagcagcctccaagtccttggaagtgcttaagcaaatcagctcaaccggt
tacctgcgtaagcgcgttccgaacgatctggttgttctgcagggcggcgcaggtgctgtg
gcattcggtggcggtgacgcatcggcggccttggacacattggtcccagcagtcgcagct
ggtggcggcatggcgcaggccgtgtcctcaactacggctgtttcatctggtaccgtgggt
ctcagcgcccgcgacaaagccaaaatgcaaggctacgaaggcgaagcctgcggcgagtgc
ggcaactacacgctggtgcgcaacggcacctgcatgaagtgcaacacctgcggcggcaca
tccggctgtagttaa

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