Octadecabacter temperatus: OSB_20030
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Entry
OSB_20030 CDS
T04001
Symbol
serS
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
otm
Octadecabacter temperatus
Pathway
otm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OSB_20030 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otm01007
]
OSB_20030 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otm03016
]
OSB_20030 (serS)
Enzymes [BR:
otm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
OSB_20030 (serS)
Amino acid related enzymes [BR:
otm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
OSB_20030 (serS)
Transfer RNA biogenesis [BR:
otm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
OSB_20030 (serS)
Prokaryotic type
OSB_20030 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
AKS46542
UniProt:
A0A0K0Y6R5
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All DBs
Position
1959237..1960529
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AA seq
430 aa
AA seq
DB search
MHDIRAIRENPAAFDAALSRRGDAPLSTELLAMDEARRAKIGAAEAAQAEANKAAKEVGA
AKGRGDEAEFERLRSLVSEKKAEISALNDEAKAQDAALTERLAVIPNLPADDVPMGADEN
DNSEISTWGTPREFDFKPVEHFEIAGVKPSMDFETAAKISGSRFVLMSGAVARVHRALAQ
FMLDIHTLENGLTEVNPPVLVRDDAMYGTDKLPKFAEDSYQTTEGMWLISTSEIPLTYIA
ANHVIDESYLPRRYTAHSLCFRSEAGSAGRDTSGMLRQHQFEKVEMVSVTHPDESDAEQK
RMLRCAEDLLERLEIPYRTVLLCTGDMGFGARRTFDIEAWLPGQNAYREISSVSTTGEFQ
ARRMNARFKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQQEDGSVVLPKALHGYMGGK
TNINADGSLS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacattcgcgccatccgagagaaccccgcagcttttgatgcggccttgtcccgc
cgcggcgatgcgcctttgtcgactgagctgttggccatggacgaagcgcgccgcgcaaag
atcggtgcagcggaagccgcgcaagccgaagctaacaaagccgccaaagaggttggcgct
gcgaaagggcgtggtgatgaggccgaattcgaacgcctgcgttcccttgtatctgaaaag
aaagcggaaatttccgcactgaacgacgaagccaaagcacaagatgcggctttgaccgag
cgccttgccgtgatccccaacctgccagccgatgatgtgccaatgggcgcggatgaaaac
gacaactctgaaatctcgacgtggggcaccccgcgcgagtttgatttcaagccggttgag
cactttgaaattgctggcgtcaaacccagcatggattttgaaacggccgcgaaaatttct
ggcagtcgctttgtgctgatgtccggtgccgtggcacgcgttcatcgtgcactcgcgcag
tttatgttggatattcatacgcttgagaacggattgaccgaagtgaacccgcccgtcctt
gtgcgtgatgacgcgatgtatggaaccgacaagctgccaaagttcgctgaagacagctac
caaacgactgagggcatgtggctgatttccacgtctgaaatcccgctcacgtatatcgcg
gcgaaccatgtcatcgatgaatcctaccttccccgccgctacaccgcgcattcgctttgc
ttccgctccgaggcgggcagtgcgggtcgtgacacctcaggcatgttgcgccagcaccag
tttgaaaaggttgagatggtgtctgtgacgcatcctgacgaatccgatgctgagcaaaaa
cgcatgctgcgttgcgcagaagatttgctggaacgtctagaaattccttacagaaccgtt
ctgctttgcaccggtgacatgggctttggcgcacgccgcacctttgacatcgaagcatgg
cttccgggacagaatgcttaccgcgagatcagctcggtttctacgacgggcgaattccaa
gcccgccgcatgaacgcacgtttcaaaccagcagatggtggcaagccgcaattcgttcac
acgttgaacggttcgggccttgcggtcgggcgttgcttgattgcggttcttgagaacggc
cagcaagaagacggctcggtcgtgctccccaaggccttgcacggctatatgggtggcaag
acaaacatcaacgctgacggctcccttagctaa
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