Octadecabacter temperatus: OSB_20470
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Entry
OSB_20470 CDS
T04001
Symbol
rhlE_1
Name
(GenBank) ATP-dependent RNA helicase RhlE
Organism
otm
Octadecabacter temperatus
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AKS46586
UniProt:
A0A0K0Y6R0
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Position
2003087..2004703
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AA seq
538 aa
AA seq
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MFATQKGRQYGQPSRVTIAAYCCKLRERIKLTKFSDLNLDKKVLKAVEETGYETPTPIQA
GAIPPALEGRDVLGIAQTGTGKTASFTLPMISMLKRGRARARMPRSLVLAPTRELAAQVA
ENFDAYAKHTKLTKALLIGGVSFKEQDALIDRGVDVLIATPGRLLDHFERGKLILSDVKI
MVIDEADRMLDMGFIPDIERIFGLTPFTRQTLFFSATMAPEIERITNTFLSNPAKVEVAR
AATTSENIKQGVVMFKGGQKQAVEKQKLLRDLIKSEGDECRNGIIFCNRKIDVDAVAKSM
TKAGLDASPIHGDLDQTHRMKTLAGFRDGTLRFLVASDVAARGLDIPNVSHVFNYDVPSH
AEDYVHRIGRTGRAGKKGTTIMICTPRDEKNFDDIERLVEMTIPRVEMPGGTPKAVAADE
SKQDSAPAEDKPKRTRIRGGRGRKSDTAKAEAAPVEVKAETPKQDAPAPKAEEPKVEAPK
AAEAPRQDTTDKPKRSRGGRNRGGGGNRDNNDRGPKIVGMGDSAPDFIAKSFDERHGS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgccacccaaaagggcaggcaatacggccagcccagccgcgtgacgattgcggct
tactgctgcaaactccgcgaaaggattaaattgaccaaattcagtgacttaaacctcgac
aagaaggtcctcaaggccgtcgaagaaaccggctacgaaacgccgacccctattcaagct
ggggcgattccccctgcccttgaaggtcgtgacgttcttggcattgcccaaacgggtacc
ggtaaaaccgccagcttcacgctgccgatgatttccatgcttaagcgcggccgcgcacgg
gcgcgtatgccgcgttccttggtgctggccccaacgcgtgaattggcagcacaggttgcc
gaaaacttcgatgcctatgccaagcacacaaaactgacgaaggccctgctgattggtggc
gtttcgttcaaagaacaagacgcgctgattgatcgcggcgttgacgttctgatcgcgacg
cctggccgcctgcttgaccattttgagcgcggcaagctgatcctgtctgacgtgaaaatc
atggtcatcgacgaagctgaccggatgctcgacatgggtttcatcccagatatcgaacgc
attttcggcctgacaccattcacgcgccaaacattgttcttctctgcgacgatggcaccg
gaaatcgagcgcattaccaatacgttcttgtccaacccagccaaagtcgaagtggcccgt
gcggcgacgacgtctgagaacatcaagcaaggtgtggtgatgttcaaaggcggccaaaag
caggccgttgaaaaacagaagctgctgcgtgacctgatcaaaagcgaaggcgatgaatgc
cgcaatgggatcatcttctgtaaccgcaagatcgacgtagatgctgttgcaaaatccatg
accaaggcggggcttgatgcctcccctattcacggtgatctggaccaaacgcaccggatg
aagacccttgcagggttccgcgatggtacgttgcgcttcctcgtggcgtctgacgtggca
gcccgtggtcttgatattccgaacgtgtcccacgtgttcaactacgacgttccgagccat
gctgaagactatgttcaccggattggtcgcacgggtcgtgcgggcaaaaagggtacaaca
atcatgatttgcaccccgcgcgacgagaagaacttcgatgacatcgaacgtcttgtcgaa
atgacaatcccacgggtcgaaatgcctggcggaacgccgaaagctgtcgctgcggatgaa
tccaaacaggattcagctccagctgaggacaagccaaagcggactcgcattcgtggtgga
cgtggtcgtaaaagcgatactgcaaaagctgaagctgcacccgttgaagttaaggcagaa
acgccgaagcaagacgcaccagcgcccaaagccgaagagcctaaggtggaagcaccaaaa
gcagctgaagcgccacgtcaggacacaacagacaagcccaagcgttcacgcggcgggcgc
aatcgtggtggcggcggaaaccgtgacaacaatgatcgcggtcctaagatcgtcggcatg
ggggatagtgcccccgattttatcgccaaaagctttgacgagcgccacggaagctaa
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