Octadecabacter temperatus: OSB_21810
Help
Entry
OSB_21810 CDS
T04001
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
otm
Octadecabacter temperatus
Pathway
otm03030
DNA replication
otm03430
Mismatch repair
otm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
otm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OSB_21810 (holB)
03430 Mismatch repair
OSB_21810 (holB)
03440 Homologous recombination
OSB_21810 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otm03032
]
OSB_21810 (holB)
03400 DNA repair and recombination proteins [BR:
otm03400
]
OSB_21810 (holB)
Enzymes [BR:
otm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OSB_21810 (holB)
DNA replication proteins [BR:
otm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OSB_21810 (holB)
DNA repair and recombination proteins [BR:
otm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OSB_21810 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_33
AAA_22
AAA_5
AAA_29
AAA_24
NTPase_1
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AKS46719
UniProt:
A0A0K0Y6Z0
LinkDB
All DBs
Position
2136966..2138093
Genome browser
AA seq
375 aa
AA seq
DB search
MATAPEDRPLPDQIEGAPHPSETVDLFGQSRAETDFLDAFASGRLHSGWLITGPQGVGKA
TLAWRMAAFLLSQPLVAEDDMFGAPPPPTSLMLDDEHPDMRLIRSGAHPRLFVLRRAWDD
KKDKLKSVITVDEVRKLKNFFGMSATDGGRRVVIVDPADEMNVNAANAILKLLEEPPADA
VILMLSHQPSRLLPTIRSRCRELRCGLLGTDDVTAALAAAGIETDAGEALTALSGGSVGE
AIRLTNLDGLTVYSELVSLFNGLPRFDRQRGAKLADSCTGKAGATRFALVLDLIDKFLAR
TARAGIQGPPQTQAAQGEAALLAKLSPHDAAARRWAALAQDVSERTRHGKAVNLDPAALI
LDTLFKIEKAAQDVT
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcccccgaagaccgccccctccccgaccagatcgaaggcgcaccgcatccg
tctgaaaccgttgatctattcggccaatcccgcgccgagacggattttctagatgccttt
gcatctggccgtctccattccggctggctaatcacaggtccacaaggtgtcggcaaagcc
acgctcgcatggcgcatggccgcgtttctgctgtcccaaccccttgttgccgaagatgat
atgttcggcgcgccgcctccaccgacaagcctaatgctggacgacgaacaccctgatatg
cgtttgatccgttccggcgcgcacccgcgtttgtttgtgctgcgtcgcgcgtgggatgac
aaaaaggacaagctcaagtccgtcatcacagtggatgaagtgcgtaagctcaagaacttc
tttggcatgtccgcaacagatggtgggcgtcgcgtggtcatcgtcgacccagcggacgaa
atgaacgtcaacgccgccaacgcgatccttaaactgctggaagaaccgcccgctgatgcc
gtgatcctgatgctctcgcaccaaccatcgcgcctattgccaacaattcggtcgcggtgc
cgcgaattgcgctgcggtctgcttggcacggatgatgtgacagcggcccttgccgccgct
ggaattgaaacggacgcgggcgaagccctgaccgcactttccggtggatccgtgggcgaa
gcaatccgtctgaccaacctagacggcctaactgtgtattccgaattggtaagcctattt
aacggcttgccaaggtttgatcgccagcgcggcgcgaagcttgcagatagttgcacgggc
aaagcaggtgccacgcggttcgctttggttctcgaccttatcgataaattccttgcccgc
accgcgcgtgctggcatccaaggtccgccccaaacccaagccgcacaaggcgaagcggcg
cttttggcaaagctatccccacatgatgcagccgcacggcggtgggcggcattggcccaa
gacgtgtccgagcgcacccgccatggtaaggccgtcaatcttgaccctgccgccctcatc
cttgatacgctatttaagatcgaaaaggccgcgcaggacgtgacctaa
DBGET
integrated database retrieval system
