Octadecabacter temperatus: OSB_30180
Help
Entry
OSB_30180 CDS
T04001
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
otm
Octadecabacter temperatus
Pathway
otm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSB_30180 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otm03019
]
OSB_30180 (pnp)
03016 Transfer RNA biogenesis [BR:
otm03016
]
OSB_30180 (pnp)
Enzymes [BR:
otm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OSB_30180 (pnp)
Messenger RNA biogenesis [BR:
otm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OSB_30180 (pnp)
Transfer RNA biogenesis [BR:
otm03016
]
Prokaryotic type
tRNA degradation factors
OSB_30180 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-ProteinID:
AKS47534
UniProt:
A0A0K0Y996
LinkDB
All DBs
Position
2951221..2953353
Genome browser
AA seq
710 aa
AA seq
DB search
MFKEVKKSIQWGEETLTLETGKVARQADGTVIATYGETTVMANVTFAKKQKPGQDFFPLT
VHYGEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVDGFKNEVLVICTVLSH
DLVNDPDMVAMIAASAALTISGAPFMGPIAACRVGFEDGDYILNPEMDDMHKLRENPEQR
LDLVVAGTKDAVMMVESEAYELSEDEMLGAIEFAHEQIQPVIDLIIDLAEDSAKAPFDFS
APDYSDLSKAVAKAGEKQMRKAFAISDKQERTTAVGEARTAIKEALSEEQLEDENLGSAM
KGLEASILRGDVVKTGKRIDGRKTDEIRDIVSETGILPRTHGSALFTRGETQGLVVTTLG
TGDDEQMIDSLQGMYKSNFLLHYNFPPYSVGEVGRFGPPGRREIGHGKLAWRALQAVLPA
ATDFPYTVRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLIMEDDGKYA
ILSDILGDEDHLGDMDFKVAGTENGITSLQMDIKIAGITPAIMKEAMAQAKAGRVHILGE
MNKALSSAAEFSEHAPRIETMQVPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASPNGEAIKKAYDMIWSIVAEPEEGMVYTGTVVKIVDFGAFVNFFGKKDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQETGEEIKEEKKED
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagaagttaaaaaatccatccagtggggcgaagaaacgctgacactggaaaca
ggtaaggttgcgcgtcaggcagacggcaccgtcatcgcgacatacggcgagacaactgtt
atggcgaacgtcacgttcgcaaagaagcaaaagccgggccaagatttcttcccgctgaca
gttcactacggtgaaaagtattacgccgccggtaaagttccaggtggtttcttcaagcgc
gaagcacgcccaacagaaaaagaaacactgacagcccgcctgatcgaccgtccgatccgc
ccgctgttcgttgatggtttcaagaacgaagtactggttatctgtactgttctgtcccac
gacctcgttaacgacccagacatggttgcaatgatcgcggcatccgctgcgctgacgatc
tctggcgcgccgttcatgggcccaatcgctgcttgccgcgttggttttgaagatggcgat
tacatcctgaaccctgaaatggacgacatgcacaagctgcgtgaaaacccagagcagcgt
ttggaccttgttgttgcaggcaccaaagacgccgtgatgatggttgaatccgaagcatac
gaactttctgaagacgaaatgctcggtgcaatcgaattcgctcatgagcagatccagccg
gttatcgacctgatcattgatctggccgaagactcagccaaagcaccgttcgacttttcc
gcacctgactattccgacctgtccaaggctgttgccaaggctggcgaaaagcagatgcgc
aaagcgttcgcgatttccgacaagcaggaacgcacaacggctgttggcgaagcacgcaca
gcgatcaaagaagcgctgagcgaagagcagctcgaagacgagaacctcggttccgcgatg
aaaggccttgaggcttccatcctgcgtggtgacgttgttaagactggtaagcgtatcgat
ggtcgtaagactgacgaaatccgcgacatcgtttccgaaactggcattttgccacgtaca
cacggttccgcattgttcacacgtggcgagacacagggtcttgttgtaacgacattgggt
actggcgacgacgagcagatgatcgacagccttcagggcatgtataagtcgaacttcctg
ctgcactataacttccctccttactctgttggtgaagttggtcgtttcggccctccaggt
cgtcgtgaaatcggccacggtaagctcgcttggcgtgcgcttcaggcggttctgcctgcg
gcaactgatttcccatacaccgttcgcgttgtgtcagagatcactgaatccaacggttcg
tcttctatggcgtccgtttgtggtggctccttgtccatgatggacgcgggtgttccactc
aaagcaccagttgctggtgttgcgatgggcctgatcatggaagacgatggcaagtacgcc
attctgtccgacatcttgggtgacgaagaccacctcggcgacatggacttcaaggttgct
ggtacggaaaacggcatcacatccttgcagatggacatcaagatcgcaggcatcacgcca
gcaatcatgaaagaagcgatggcacaagccaaagcgggccgcgttcatatccttggcgaa
atgaacaaagcgctgtcctcagcggctgagttctccgagcacgcaccacgcatcgaaacg
atgcaggttccaacggacaaaatccgtgaagtgatcggttctggcggtaaagtcatccgt
gaaatcgttgaagtgtccggcgctaaggtcgacatcaacgacgaaggcatcatcaagatc
gctagcccgaacggcgaagccatcaagaaagcctacgacatgatctggtccatcgtagct
gaacctgaagagggcatggtttacacgggtactgttgtgaagatcgtagacttcggtgca
ttcgtgaacttcttcggtaagaaagacggccttgtgcacgtttctcagatcgaaaaccgt
cgcctgaaccacccatctgacgttctgaaagaaggtcaggaagttaaagttaagcttctg
ggctttgacgaccgcggcaaggttcgcctgtccatgaaggttgttgatcaggaaactggt
gaagaaatcaaagaagagaagaaagaagactaa
DBGET
integrated database retrieval system
