Octadecabacter temperatus: OSB_31090
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Entry
OSB_31090 CDS
T04001
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
otm
Octadecabacter temperatus
Brite
KEGG Orthology (KO) [BR:
otm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otm03032
]
OSB_31090 (hup)
03036 Chromosome and associated proteins [BR:
otm03036
]
OSB_31090 (hup)
03400 DNA repair and recombination proteins [BR:
otm03400
]
OSB_31090 (hup)
DNA replication proteins [BR:
otm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OSB_31090 (hup)
Chromosome and associated proteins [BR:
otm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OSB_31090 (hup)
DNA repair and recombination proteins [BR:
otm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OSB_31090 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AKS47623
UniProt:
A0A0K0Y9J2
LinkDB
All DBs
Position
complement(3037984..3038274)
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AA seq
96 aa
AA seq
DB search
MATKPMTKTQLVATLAEDMGTDKKSASAALDAIVGLITREVSGGGAVTLPGVGKIYCRER
PERMVRNPATGEQIKKDADKVVKMTIAKALKDSVNG
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggctacgaaaccaatgacaaagacacagctggttgcaacacttgctgaggacatgggt
acagacaagaaatccgcttccgcagcactggacgcgattgttggcctgatcacacgcgaa
gtttccggcggtggcgctgttacgcttccaggagttggcaaaatttattgccgtgagcgt
cctgagcgtatggttcgcaacccagcaactggcgagcagatcaaaaaagacgcagacaag
gttgtcaaaatgacaatcgcgaaagcactcaaggacagcgtgaacggctaa
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