KEGG   Octadecabacter temperatus: OSB_32090
Entry
OSB_32090         CDS       T04001                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
otm  Octadecabacter temperatus
Pathway
otm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:otm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OSB_32090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otm03021]
    OSB_32090
   03019 Messenger RNA biogenesis [BR:otm03019]
    OSB_32090
Transcription machinery [BR:otm03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     OSB_32090
Messenger RNA biogenesis [BR:otm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     OSB_32090
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N S1CSD-TOTE-2 NACHT AAA_25 AAA_22 OB_RNB AAA Fungal_virus_P2_C
Other DBs
NCBI-ProteinID: AKS47722
UniProt: A0A0K0YA10
LinkDB
Position
complement(3141080..3142381)
AA seq 433 aa
MSDDVVLDENMPTDRLNLADLKAQSPKNLLSLAEELEIENASTMRKGDMMFSILKERAED
DWVIGGDGVLEVVQDGFGFLRSPGANYLPGPDDIYVSPEMIRLHALRTGDTVEGVIKAPL
ETERYFALTKVEKINFEEPERARHKVAFENLTPLYPEERLQMETDDPTTKDRSARIIDLV
APIGKGQRSLIVAPPRTGKTVLLQNIAHSIAANHPECYLIVLLIDERPEEVTDMQRSVKG
EVVSSTFDEPASRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTTVPSSGKVL
TGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVL
DRKIADKRVFPAMDILKSGTRKEDLLVDKVDLQKTYVLRRILNPMGTTDAIEFLISKLKQ
TKTNSDFFDSMNT
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgtccgatgacgtagtgcttgacgaaaacatgccgacagaccgtttgaaccttgctgac
cttaaggcgcaaagtccaaaaaaccttctctctcttgctgaagagcttgagattgagaac
gcgtcgacgatgcgcaagggcgacatgatgttttcgatccttaaggaacgtgctgaggat
gattgggtaattggtggtgacggcgttttagaagtcgttcaggatggtttcggatttcta
cgctctcctggtgcgaactacctgccaggtccagatgacatttacgtttcgccggaaatg
atccgcctccatgcgcttcgtacaggtgatactgttgagggcgtcatcaaagcgcctttg
gaaaccgaacgttattttgcgctgactaaagttgaaaaaatcaactttgaagaaccagaa
cgcgcgcgccacaaagtcgctttcgaaaacttgacgccactttacccagaagaacgtctt
cagatggaaacagatgatcccacgaccaaagaccggtccgcgcggattatcgatttggtc
gcgccaattggtaaaggtcaacgttccttgatcgttgcgccacctcgtacaggtaaaact
gtgctgcttcagaatatcgcgcactcaatcgctgcgaaccaccctgagtgctatttgatc
gttcttttgatcgatgaacgtcctgaggaagttaccgacatgcagcgctcagttaagggc
gaagttgtttcctcaacatttgatgagcctgcgtcgcgccacgttgctgtgtccgaaatg
gttattgagaaagccaaacgcctcgttgaacataagcgcgacgttgtgattctgctcgat
tcaatcacgcgcctgggccgtgcgtttaacacgactgtgccgtcttctggtaaggttctg
actgggggtgtggacgccaacgccttgcaacgccctaagcgcttctttggtgctgcacga
aacatcgaagaaggtggttctttgacgattatcgcgacagcgttgatcgatacaggtagc
cgcatggacgaagttatctttgaagaattcaaaggtacgggtaactctgagatcgttctt
gatcgtaagattgctgataagcgcgtattccctgcaatggatattctgaaatcaggcaca
cgtaaggaagacctgttggttgataaagttgacctgcagaaaacctacgtgttgcgtcgt
attttgaacccgatggggacaactgacgcgattgaattcctgatttcgaagttaaaacag
accaagacgaactcggacttcttcgactctatgaacacgtaa

DBGET integrated database retrieval system