Ottowia sp. oral taxon 894: ADJ79_06150
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Entry
ADJ79_06150 CDS
T04031
Name
(GenBank) RNA ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
oto
Ottowia sp. oral taxon 894
Brite
KEGG Orthology (KO) [BR:
oto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oto03016
]
ADJ79_06150
Enzymes [BR:
oto01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ADJ79_06150
Transfer RNA biogenesis [BR:
oto03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ADJ79_06150
Prokaryotic type
tRNA splicing ligases
ADJ79_06150
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Ortholog
Paralog
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GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AKU68091
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All DBs
Position
1437721..1438959
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AA seq
412 aa
AA seq
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MEVNNENGHYLQMQIGGAAPIKMWTRGVPVEEDARQQLKNIASLPVVFKHVAVMPDVHLG
IGATIGTVIPTIKAIIPAAVGVDIGCGMMACKTTLTASDLPDDLGPLRSAIEKAVPHGMT
PKKYGRDKGGWETPPAETDAAWTRLADEFRQLCELHPRLEKTNNYKHLGTLGTGNHFIEI
CLDENQAVWIMLHSGSRGVGNAIGTHFIELAKQDARLHQQNLPDENLAYFEEGARYFGEY
VKAVDWAQKFAAANREVMMTRVINAMRKVIAKPFETHVEAVNCHHNYVQRETHFGQAVFV
TRKGAVSAEKGRLGIIPGSMGAKSYIVRGKGHPDSFNSCSHGAGRTMSRTQAKKLFTEAD
QIRATEGVECRKDAGVIDEIPMAYKDIDAVMAAQADLVDVLHTLKQVVCVKG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
attgaggtgaataacgaaaacgggcattacctgcaaatgcaaatcggcggcgctgcgccc
atcaaaatgtggacccggggcgtgccggtagaagaagacgcgcgccagcaattaaaaaat
atcgccagcctgcccgtggtattcaaacacgtggcggtgatgccggatgtgcatctgggc
atcggcgccacgattggcacggtgattccaaccatcaaagccattattccggcagcggtg
ggcgtggatattggctgcggcatgatggcctgcaaaaccacgctgacggccagcgatttg
cccgacgatctggggccgctgcgcagcgccattgaaaaagcggtgccgcacggcatgacg
cccaagaaatatggccgcgacaaaggcggctgggaaacgccgcccgctgaaacagacgcg
gcctggacccgtttggccgatgaattcaggcaattgtgcgaattacacccgcgcctggaa
aagacgaataattacaaacacctgggcacgctgggcacgggcaaccatttcattgaaatt
tgcctggatgaaaatcaggccgtgtggatcatgctgcattccggctcgcgcggcgtgggc
aatgccatcggcacgcatttcattgaattggcgaaacaagatgcgcgattgcaccagcaa
aatctgccggatgaaaacctggcctattttgaagaaggcgcgcggtatttcggtgaatat
gtgaaagccgtggactgggcgcagaaattcgccgccgccaaccgcgaagtgatgatgacg
cgcgtgattaacgctatgcgaaaagtcattgccaagccatttgaaacgcatgtggaagcg
gtgaattgccaccataactacgtgcagcgcgaaacgcattttggccaggcggtttttgtc
acgcgcaagggcgcggtcagcgccgaaaaggggcggctgggcatcattcccggcagcatg
ggcgccaaaagctacatcgtgcgcggcaaggggcaccccgacagcttcaacagttgcagc
cacggcgcaggccgcaccatgagccgcacccaggcgaaaaaactgttcacggaggccgac
caaatcagggcgaccgaaggcgtggaatgccgcaaggacgcaggcgtgattgacgaaatt
ccaatggcctacaaggacatagacgccgtaatggccgcccaggccgatttggtggacgtg
ctgcacacgctcaagcaggtggtgtgcgtgaaggggtga
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