Ottowia sp. oral taxon 894: ADJ79_07660
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Entry
ADJ79_07660 CDS
T04031
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
oto
Ottowia sp. oral taxon 894
Pathway
oto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ADJ79_07660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oto03019
]
ADJ79_07660
Enzymes [BR:
oto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ADJ79_07660
Messenger RNA biogenesis [BR:
oto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ADJ79_07660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKU68129
LinkDB
All DBs
Position
complement(1749296..1750804)
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AA seq
502 aa
AA seq
DB search
MTTAYSTLALAEPLKRAVAEMGYENMTPIQAQAIPVVLAGQDVMGAAQTGTGKTAAFSLP
LLQRLLKHENTSASPARHPVRALVLLPTRELADQVAQQIALYAKYTHLRSAVVFGGVDMK
PQTAELKKGVEVLVATPGRLLDHIEAKNAVLGQVEYVVLDEADRMLDIGFLPDLQRILSH
LPKSRTTLLFSATFSPEIRRLAESYLHQPVAIEAARPNETAATVEQLFFSVDGDDKRRAV
RHILKERDLRQAFIFTNSKLGCARLTRALERDGLRCAALHGDKSQDERLKALEAFKAGEV
DLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRIGRTGRAGASGLAVTLVAPGDARL
VAEVEKLIKKKVQVQPLALPGGERREGREDRGRRDFRDRRDGRSDGRPDASARDSVYATR
QLPGQPTDPFFDRPYEPAAQGEAAELPAWEKAARSAPAIARPGLLSPNIKPRRQVAALFK
PRAQEPGEADAAPSQAPDGQPG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgcttattcaacactggcgcttgccgagccgctcaagcgcgccgtggccgag
atgggctacgaaaacatgacccccatccaggcgcaggccattcccgtggtgctggccggg
caagacgtgatgggcgcggctcaaaccggcacgggcaaaacggcggccttctcgctgccg
ctgctgcaaaggctgctcaagcacgaaaacacctccgcctcgcccgcgcgccaccccgtg
cgtgcgctggtgctgctgcccacgcgcgagctggccgaccaggtggcgcagcaaatcgcc
ctgtatgccaaatacacgcacttgcgcagcgccgtcgtctttggcggcgtggacatgaag
ccgcaaaccgccgagctgaaaaagggcgtggaagtgctggtggccacgccgggccgcctg
ctcgatcacatcgaagccaaaaacgccgtgctcggccaggtggaatacgtggtgctggac
gaggccgaccgcatgctggacatcggctttctgcccgatttgcagcgcatcctcagccac
ctgccaaaaagccgcaccacgctgctgttttcggccactttctcgcctgaaatccggcgg
ctggccgaaagctacctgcaccagcccgtcgccattgaagcggcccgccccaacgaaacg
gcggccacggtcgagcagctttttttcagcgtggacggcgacgacaagcgccgcgccgtg
cgccacattctcaaagagcgcgatttgcgccaggccttcatcttcaccaacagcaagctg
ggctgcgcgcgcctgacgcgcgcgctggagcgcgacggcctgcgctgcgccgccctgcac
ggcgacaaaagccaggacgagcgcctgaaggcgctggaggccttcaaggccggcgaagtc
gatttgctggtctgcaccgacgtggccgcgcgcgggctggacatcaaggacgtgcccgcc
gtcttcaattacgacgtgcctttcaacgccgaagactacgtgcaccgcattggccgcacg
ggccgcgcgggcgcttcggggctggccgtcacgctggtggccccgggcgacgcgcggctg
gtagccgaggtggaaaagctcatcaagaaaaaagtgcaggtgcagccgctggcgctgccc
ggcggcgagcggcgggaagggcgcgaagaccgtgggcggcgcgatttccgcgaccgcagg
gacggccgttcagacggccgcccagatgccagcgcgcgcgacagcgtctatgccacgcgc
cagttgccaggccagccgacagacccctttttcgaccggccctacgagcctgccgcgcag
ggcgaagccgccgaattgcccgcctgggaaaaagccgcccgcagcgccccggccatcgcc
cggcccggcctgctctcgcccaacatcaagccccggcggcaggtggcggcgttgttcaag
ccccgcgcgcaggagccgggcgaggcggacgctgcgccaagccaggcaccggacgggcag
cccggctga
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