KEGG   Oryzomicrobium terrae: OTERR_01130
Entry
OTERR_01130       CDS       T06190                                 
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
otr  Oryzomicrobium terrae
Pathway
otr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:otr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    OTERR_01130 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:otr03400]
    OTERR_01130 (xthA)
Enzymes [BR:otr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     OTERR_01130 (xthA)
DNA repair and recombination proteins [BR:otr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     OTERR_01130 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 DUF4088 SNU71_N
Other DBs
NCBI-ProteinID: QEL63589
UniProt: A0A5C1E4Y8
LinkDB
Position
complement(123716..124507)
AA seq 263 aa
MLRIVSLNLNGIRSAWNKGFPDWVASHGADIFCFQELKAQIPDLSPDMVAPPGYHAYYHC
AEKRGYSGVGLWSRHEPDRVVEGIGHPGFDAEGRYLRADFGKLTVVSLYLPSGSSSEERQ
QAKFAFMAEFAPVLADLMAEAKRDGREVVVCGDWNIAHKEIDLKNWKSNQKNSGFLPEER
AWLSNLFEQGGWVDAFRRVDDRAERYTWWSNRGQAWAKNVGWRIDYQIATPGLADAARHA
EIWVDSRFSDHAPLTLDYDFTLA
NT seq 792 nt   +upstreamnt  +downstreamnt
atgttacgcatcgtctcactgaatctcaacggcatccgctccgcctggaacaagggtttc
cccgactgggtcgccagccacggggccgacatcttctgctttcaggaattgaaggcccag
attcccgacctgtccccggacatggtcgccccgccgggttaccacgcctactaccactgc
gccgaaaagcgcggctacagtggcgtcggcctgtggagccggcatgaaccggaccgggtg
gtggaaggcattggccacccgggcttcgacgccgagggccgctacctgcgcgccgacttc
ggcaagctcacggtagtgtccctgtacctgccctcgggctccagttcggaggaacgacag
caagccaagttcgccttcatggccgaattcgccccggtgctggccgacctgatggccgag
gccaagcgcgacggccgggaagtggtggtgtgcggcgactggaacatcgctcacaaggaa
atcgacctgaagaactggaagtcgaaccagaagaactccggctttctgcctgaggaacgg
gcctggctgtccaacctgttcgagcagggcggctgggtggacgccttccgccgggtcgac
gaccgcgccgagcgctacacctggtggtcgaaccggggccaagcctgggccaagaacgtg
ggctggcggatcgattaccagatcgccacgccggggctggccgacgcggcccgccacgcc
gaaatctgggtggacagccgtttttccgaccacgccccgctcaccctggactacgacttc
accctggcgtga

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